Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10014074m |
Family | CE16 |
Protein Properties | Length: 354 Molecular Weight: 38171.7 Isoelectric Point: 8.4344 |
Chromosome | Chromosome/Scaffold: 3 Start: 5689779 End: 5692110 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 101 | 344 | 2.5e-22 |
GKNLLIGANFASAASGYDDKAALLNHAIPLYQQVEYFKEYKSKLIKIAGSKKADSIISGAICLLSAGSSDFVQNYYVNPLLNKVYTVDQYGSYLIDNFST FIKQVYGVGARKIGVTSLPPTGCLPAARTLFGFHEKGCVQRLNTDAQQFNKKLNAAASKLQKQYSGLKIVVFDIFTPLYDLVQNPSKSGFTEATKGCCGT GTVETTSLLCNPKSLGTCPNATQYVFWDSVHPSEAANEILASAL |
Full Sequence |
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Protein Sequence Length: 354 Download |
MDRCTMSFLL LALVSSFSVL QISFAQLVPA IMTFGDSVVD VGNNNYLPTI FRADYPPYGR 60 DFANHKPTGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS GKNLLIGANF ASAASGYDDK 120 AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIISGA ICLLSAGSSD FVQNYYVNPL 180 LNKVYTVDQY GSYLIDNFST FIKQVYGVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVQ 240 RLNTDAQQFN KKLNAAASKL QKQYSGLKIV VFDIFTPLYD LVQNPSKSGF TEATKGCCGT 300 GTVETTSLLC NPKSLGTCPN ATQYVFWDSV HPSEAANEIL ASALIGQGFS LLG* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00657 | Lipase_GDSL | 2.0e-14 | 153 | 344 | 198 | + GDSL-like Lipase/Acylhydrolase. | ||
COG3240 | COG3240 | 3.0e-15 | 34 | 345 | 336 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
cd01846 | fatty_acyltransferase_like | 8.0e-37 | 33 | 344 | 315 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
PLN03156 | PLN03156 | 6.0e-112 | 28 | 345 | 318 | + GDSL esterase/lipase; Provisional | ||
cd01837 | SGNH_plant_lipase_like | 2.0e-143 | 29 | 345 | 317 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB63641.1 | 0 | 32 | 353 | 1 | 322 | Proline-rich protein APG isolog [Arabidopsis thaliana] |
GenBank | ABK95990.1 | 0 | 27 | 353 | 27 | 352 | unknown [Populus trichocarpa] |
GenBank | ACU20309.1 | 0 | 11 | 352 | 7 | 352 | unknown [Glycine max] |
RefSeq | NP_188258.1 | 0 | 1 | 353 | 1 | 353 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
RefSeq | XP_002298249.1 | 0 | 27 | 352 | 1 | 325 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3kvn_A | 0.006 | 160 | 341 | 148 | 309 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 3kvn_X | 0.006 | 160 | 341 | 148 | 309 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |