| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10015665m |
| Family | GT14 |
| Protein Properties | Length: 425 Molecular Weight: 48297.6 Isoelectric Point: 9.4597 |
| Chromosome | Chromosome/Scaffold: 3 Start: 5276384 End: 5278076 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 81 | 335 | 0 |
| FAYLVSGSKGDVGKLWRTLRAVYHPRNQYVVHLDLESPVDERLELASRINNDPMYSKTGNVYMITKANLVTYKGPTMVANTLHACAVLLKRSANWDWFIN LSASDYPLVTQDDLLHTFSTLDRNLNFIEHTSQLGWKEEKRAQPLMIDPGLYLLNKSDIYWVTPRRSLPTAFKLFTGSAWMALSRPFVEYCIWGWDNLPR TLLMYYTNFVSSPEGYFQTVICNVPEFSKTAINHDLHYISWDNPPQQHPHVLSLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 425 Download |
| MGYVNVEKRW VFPLVITSLV CVFLLATSFN MGLVSSLRTI NGIFSIIPSR LVSNQTRLDF 60 AESKVARQTR VPPHQDKLPR FAYLVSGSKG DVGKLWRTLR AVYHPRNQYV VHLDLESPVD 120 ERLELASRIN NDPMYSKTGN VYMITKANLV TYKGPTMVAN TLHACAVLLK RSANWDWFIN 180 LSASDYPLVT QDDLLHTFST LDRNLNFIEH TSQLGWKEEK RAQPLMIDPG LYLLNKSDIY 240 WVTPRRSLPT AFKLFTGSAW MALSRPFVEY CIWGWDNLPR TLLMYYTNFV SSPEGYFQTV 300 ICNVPEFSKT AINHDLHYIS WDNPPQQHPH VLSLNDTVPM ISSGAAFARK FKRDDEVLDK 360 IDKELLRRRN DKDSFTPGGW CSGKPKCSMV GDVARIEPSV GAQRLQGLVN RLVNEAKTGV 420 SQCK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-86 | 81 | 336 | 260 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 1 | 424 | 424 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK83637.1 | 0 | 1 | 424 | 1 | 424 | AT3g15350/K7L4_15 [Arabidopsis thaliana] |
| RefSeq | NP_566506.1 | 0 | 1 | 424 | 1 | 424 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002317501.1 | 0 | 1 | 424 | 1 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329084.1 | 0 | 1 | 424 | 1 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533550.1 | 0 | 1 | 424 | 1 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000000001 | 97 | 369 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000000001 | 97 | 369 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000000001 | 97 | 369 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000000001 | 97 | 369 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000000003 | 97 | 369 | 101 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
