y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10015888m |
Family | GH1 |
Protein Properties | Length: 536 Molecular Weight: 61560.7 Isoelectric Point: 7.2298 |
Chromosome | Chromosome/Scaffold: 3 Start: 2879031 End: 2881763 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 38 | 522 | 0 |
GSFPQGFLFGTATAAYQVEGAINETCRGPALWDIYCRRYPARCNNDNGDVAVDFFHRYKEDIQLMKSLNTDAFRMSIAWSRIFPHGRKEKGVSQAGVQFY HDLIDELIKNGIVPFVTVFHWDTPQDLEDEYGGFLSQNIVYVFFYFWGKYRKDFREYAEFVFQEYGGKVKHWITFNEPWVFSHAGYDVGKKAPGRCSPYV NPLCQDGRSGFEAYQVSHNLLLSHAEAVEVLRKCEKCKGSKVGIAHSPAWFEPHDFEDAQDGASIDRALDFMLGWHLDTTTFGDYPQIMKDIVGHRLPKF TTEQKKKLKDSTDFVGLNYYTSAFSNHLEKPDYTKPRWLQDSLVQWETKNVQNYTIGSRPFTAALNVYSRGFRSLLKYIKDKYANPEIMIMENGYGEELG ATDSVAVGTADHNRKYYLQRHLLSMQEAICIDKVNVTGYFVWSLLDNFEWQDGYKNRFGLYYIDFKNNLTRHEKESGKYYREFLS |
Full Sequence |
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Protein Sequence Length: 536 Download |
MALQKFPLLG LLLLIVIVGS PANADGPVCP PSSKLSRGSF PQGFLFGTAT AAYQVEGAIN 60 ETCRGPALWD IYCRRYPARC NNDNGDVAVD FFHRYKEDIQ LMKSLNTDAF RMSIAWSRIF 120 PHGRKEKGVS QAGVQFYHDL IDELIKNGIV PFVTVFHWDT PQDLEDEYGG FLSQNIVYVF 180 FYFWGKYRKD FREYAEFVFQ EYGGKVKHWI TFNEPWVFSH AGYDVGKKAP GRCSPYVNPL 240 CQDGRSGFEA YQVSHNLLLS HAEAVEVLRK CEKCKGSKVG IAHSPAWFEP HDFEDAQDGA 300 SIDRALDFML GWHLDTTTFG DYPQIMKDIV GHRLPKFTTE QKKKLKDSTD FVGLNYYTSA 360 FSNHLEKPDY TKPRWLQDSL VQWETKNVQN YTIGSRPFTA ALNVYSRGFR SLLKYIKDKY 420 ANPEIMIMEN GYGEELGATD SVAVGTADHN RKYYLQRHLL SMQEAICIDK VNVTGYFVWS 480 LLDNFEWQDG YKNRFGLYYI DFKNNLTRHE KESGKYYREF LSQGVRPSAI KKDEL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 2.0e-102 | 32 | 522 | 496 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 4.0e-109 | 32 | 521 | 495 | + beta-glucosidase | ||
COG2723 | BglB | 2.0e-128 | 40 | 519 | 490 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 7.0e-140 | 41 | 517 | 478 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-163 | 36 | 522 | 491 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB38783.1 | 0 | 1 | 535 | 1 | 525 | beta-glucosidase [Arabidopsis thaliana] |
DDBJ | BAH20034.1 | 0 | 1 | 535 | 1 | 524 | AT3G09260 [Arabidopsis thaliana] |
EMBL | CAA61592.1 | 0 | 1 | 535 | 1 | 524 | thioglucoside glucohydrolase [Arabidopsis thaliana] |
RefSeq | NP_176801.1 | 0 | 25 | 535 | 26 | 524 | BGLU21; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_187537.1 | 0 | 1 | 535 | 1 | 524 | PYK10; beta-glucosidase/ copper ion binding / fucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 30 | 521 | 27 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptq_A | 0 | 30 | 521 | 27 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptm_B | 0 | 30 | 521 | 27 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptm_A | 0 | 30 | 521 | 27 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptk_B | 0 | 30 | 521 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |