| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10015938m |
| Family | CE8 |
| Protein Properties | Length: 138 Molecular Weight: 15115.1 Isoelectric Point: 8.2012 |
| Chromosome | Chromosome/Scaffold: 3 Start: 9006275 End: 9006688 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 2 | 124 | 4e-32 |
| CVIQVLGGQLQPGIPGYITAQGRTNPYDANGFIFINSLVYGTGMAFLGRAWRGYSRVIFYNSNLTDVVVPEGWDAWNFDGHENQLMYAEHGCFGSGAKTG RRVKWVKKLSGSVVQDLADLSFI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 138 Download |
| RCVIQVLGGQ LQPGIPGYIT AQGRTNPYDA NGFIFINSLV YGTGMAFLGR AWRGYSRVIF 60 YNSNLTDVVV PEGWDAWNFD GHENQLMYAE HGCFGSGAKT GRRVKWVKKL SGSVVQDLAD 120 LSFINRGGWV EDLPIPA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 1.0e-26 | 14 | 137 | 125 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 2.0e-28 | 2 | 130 | 129 | + pectinesterase | ||
| PLN02304 | PLN02304 | 2.0e-30 | 2 | 131 | 133 | + probable pectinesterase | ||
| PLN02176 | PLN02176 | 1.0e-41 | 2 | 135 | 135 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 9.0e-86 | 2 | 135 | 134 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01354.1 | 0 | 2 | 137 | 196 | 331 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_189055.1 | 0 | 2 | 137 | 200 | 335 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197400.1 | 0 | 2 | 135 | 195 | 328 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002323773.1 | 1.96182e-44 | 2 | 135 | 163 | 289 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518106.1 | 2.94273e-44 | 2 | 135 | 210 | 336 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.00000000000008 | 14 | 136 | 180 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.0000000002 | 19 | 106 | 181 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
