| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10016129m |
| Family | GH35 |
| Protein Properties | Length: 850 Molecular Weight: 95966.3 Isoelectric Point: 9.1036 |
| Chromosome | Chromosome/Scaffold: 3 Start: 12917620 End: 12921704 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 53 | 357 | 0 |
| LIVNGNRELLYSGSIHYPRSTPEMWPNIIKRAKQGGLNTIQTYTFWNVHEPEQGKFNFSGRADLVKFIKLIEKNGMYVTLRLGPFIQAEWTHGGLPYWLR EVPGIFFRTDNEPFKEHTERYVRMILDKMKEEKLFASQGGPIILGQIENEYSAVQRAYKEDGLNYIKWASKLVHSMDLGIPWVMCKQNDAPDPMINACNG RHCGDTFPGPNKDNKPSMWTENWTTQFRVFGDPPTQRSAEDIAYSVARFFSKNGTHVNYYMYHGGTNFGRTSAHYVTTRYYDDAPLDEYGLEKEPKYGHL KHLHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 850 Download |
| MRIHSYDNSW LLLAILVILL SFSGALSSND KEKEKKSSTV DKKKEVTYDG TSLIVNGNRE 60 LLYSGSIHYP RSTPEMWPNI IKRAKQGGLN TIQTYTFWNV HEPEQGKFNF SGRADLVKFI 120 KLIEKNGMYV TLRLGPFIQA EWTHGGLPYW LREVPGIFFR TDNEPFKEHT ERYVRMILDK 180 MKEEKLFASQ GGPIILGQIE NEYSAVQRAY KEDGLNYIKW ASKLVHSMDL GIPWVMCKQN 240 DAPDPMINAC NGRHCGDTFP GPNKDNKPSM WTENWTTQFR VFGDPPTQRS AEDIAYSVAR 300 FFSKNGTHVN YYMYHGGTNF GRTSAHYVTT RYYDDAPLDE YGLEKEPKYG HLKHLHNALN 360 LCKKALLWGQ SRVEKPNNET EIRYYEQPGT KVCAAFLANN NTEAAETIKF KGKEYVIPPR 420 SISILPDCKT VVYNTAEIVS QHTSRNFMKS KKANKKFDFK VFTETVPSKI KGDSYVPAEL 480 YGLTKDETDY AWYTTSFKVD DSDLSKTKGK PTVRIASLGH ALHVWLNGEY LGSGHGSHEE 540 KSFVFQKPVS LKEGENHLTM LGVLTGFPDS GSYMEHRYTG PRSVSIVGLS SGPLDLTEEN 600 TWGNKVGMEG EKLGIHAKEG LEKVKWEKLS GKAPGLTWYQ TYFDAPESQS AAAIRMNGMG 660 KGLIWVNGQG VGRYWMSFLS PLGQPTQIEY HIPRSFLKPK KNLLVIFEEE PNVKPELIDF 720 VIINRDTVCS YIGENYTPSV RHWTKKKDQL QAITDDVHLT ASLKCSGTKK ITTVEFASFG 780 NPNGTCGNFT LGSCNAPVSK QVVEKYCLGK AECLIPVNKN TFQQDKKDSC PKVAKKLAVQ 840 VKCGRDKKN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 6.0e-9 | 74 | 203 | 149 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 3.0e-18 | 763 | 843 | 84 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 7.0e-20 | 48 | 203 | 162 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-149 | 52 | 359 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 48 | 843 | 823 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD24606.1 | 0 | 49 | 849 | 31 | 832 | putative beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CAA17766.1 | 0 | 44 | 849 | 52 | 831 | beta-galactosidase-like protein [Arabidopsis thaliana] |
| EMBL | CAB64750.1 | 0 | 2 | 843 | 6 | 837 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_179264.2 | 0 | 45 | 849 | 43 | 848 | BGAL13; beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_567973.1 | 0 | 44 | 849 | 39 | 845 | BGAL11 (beta-galactosidase 11); beta-galactosidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.99965e-42 | 52 | 355 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 8e-35 | 45 | 355 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 8e-35 | 45 | 355 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
