Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016184m |
Family | CE8 |
Protein Properties | Length: 577 Molecular Weight: 64838.9 Isoelectric Point: 6.7484 |
Chromosome | Chromosome/Scaffold: 3 Start: 4887356 End: 4889163 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 265 | 560 | 0 |
NVTVAKDGTGQYRTISEAVASVPEKSSSRFVIHVKEGLYVENVEVTKYKYNVVMYGDGKTKTVVSSSLNRIDKPNIDTFQTATFSVSGKGFIGRDMKFVN TAGPEKKQAVAFHSKSCQSVMYRCAFEGYQDTLYSHAGEQLYQECDIVGTVDFICGQAAAVFQNCTIRPRKSIPTQLSTVTAQSANDPNVKSGFSIINSK IYPFEGENLTATTYLGRPWKSYATVVVMKSLIGILINPQGWVPWDTMVNPPTTLNYGEYMNYGPGSGVGNRVRWIGYNPNMTELEARQFTVDDLIN |
Full Sequence |
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Protein Sequence Length: 577 Download |
MEPCRRCQKS QRSWIRWCLE VVESFSIILT VMFMLLVVKA LFWNRGCEVK SSYRRILTDK 60 STNSLGAICN VTLYSDQCYS TLLSVNSTEP RVLFRASLVT AVEDHVKILG VFSNLVSSDE 120 SVLSSLQVCD EMIVDSLEYL NETIERFDEF GKIMTNAEID EIRGKLSYVI TDHDTCLERF 180 DEIMEFDFSS YKRNIGKIKR LRDSMKKGRE LVSNSLAIVT KILGRLTKQD DNKSLLGFLE 240 TESGFPDWFG NEDRNALLTC DLTPNVTVAK DGTGQYRTIS EAVASVPEKS SSRFVIHVKE 300 GLYVENVEVT KYKYNVVMYG DGKTKTVVSS SLNRIDKPNI DTFQTATFSV SGKGFIGRDM 360 KFVNTAGPEK KQAVAFHSKS CQSVMYRCAF EGYQDTLYSH AGEQLYQECD IVGTVDFICG 420 QAAAVFQNCT IRPRKSIPTQ LSTVTAQSAN DPNVKSGFSI INSKIYPFEG ENLTATTYLG 480 RPWKSYATVV VMKSLIGILI NPQGWVPWDT MVNPPTTLNY GEYMNYGPGS GVGNRVRWIG 540 YNPNMTELEA RQFTVDDLIN KHGWLKETCV PYNGSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 6.0e-124 | 161 | 576 | 422 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 6.0e-125 | 68 | 571 | 530 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-147 | 265 | 559 | 300 | + Pectinesterase. | ||
PLN02468 | PLN02468 | 2.0e-148 | 64 | 576 | 524 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 64 | 576 | 523 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_175787.1 | 0 | 62 | 570 | 70 | 581 | ATPME1; pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43111 | 0 | 64 | 576 | 76 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265217.1 | 0 | 64 | 576 | 72 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 64 | 576 | 74 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 64 | 576 | 74 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 262 | 572 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 264 | 573 | 7 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 5e-19 | 276 | 554 | 18 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-19 | 276 | 554 | 18 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-18 | 276 | 554 | 18 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |