| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10016186m |
| Family | AA1 |
| Protein Properties | Length: 552 Molecular Weight: 61798.2 Isoelectric Point: 9.1474 |
| Chromosome | Chromosome/Scaffold: 3 Start: 4427635 End: 4429520 |
| Description | SKU5 similar 13 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 44 | 503 | 0 |
| PQQVILINGQFPGPNLNSTSNNNVVINVFNNLDEPFLLTWSGLQHRKNSWQDGVSGTSCPIPAGTNYTYHFQPKDQIGSYFYYPSTSLHRFAGGFGGLRV NSRLLIPVPYADPEEDNTILINDWFTKSHTALKNFLDSGRTLGSPDGVLINGKSGKVGHKNEPLFTMNPGKTYKFRICNVGFKSTLNFRIQGHKMKLVEM EGSHVLQNDYDSLDVHVGQCFAVLVTADQVAKNYYMVASTRFLKKEVSTVGVLSYEGSNVEPSTELPKAPVGWAWSLNQFRSFRWNLTASAARPNPQGSY HYGKINITRTIKLANTKNVVNGKVRFGFNGVSHVDTETPLKLVEYFGFADKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEIVFENHEKSMQSFHL DGHSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 552 Download |
| MQGGRLLTVL VCLASTVAMV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN 60 STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVSGT SCPIPAGTNY TYHFQPKDQI 120 GSYFYYPSTS LHRFAGGFGG LRVNSRLLIP VPYADPEEDN TILINDWFTK SHTALKNFLD 180 SGRTLGSPDG VLINGKSGKV GHKNEPLFTM NPGKTYKFRI CNVGFKSTLN FRIQGHKMKL 240 VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVLSYEG 300 SNVEPSTELP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK 360 NVVNGKVRFG FNGVSHVDTE TPLKLVEYFG FADKVFKYNV IKDEPAAKIT TLTVEPNVLN 420 ITFRTFVEIV FENHEKSMQS FHLDGHSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY 480 PKSWSAILLT FDNAGMWNIR SENWERRYLG EQMYVSVLSP EKSLRDEYNI PLNTNLCGIV 540 KGLPLPAPYT I* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 1 | 551 | 552 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 6 | 538 | 534 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 17 | 548 | 533 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 15 | 538 | 528 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 10 | 541 | 546 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10639.1 | 0 | 4 | 550 | 3 | 558 | putative pollen specific protein [Arabidopsis thaliana] |
| EMBL | CAA47177.1 | 0 | 24 | 549 | 25 | 552 | Bplo [Brassica napus] |
| RefSeq | NP_175953.1 | 0 | 1 | 550 | 1 | 553 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_187948.1 | 0 | 1 | 551 | 1 | 551 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_564697.1 | 0 | 4 | 550 | 3 | 549 | sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 497 | 5 | 503 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1asq_A | 0 | 28 | 497 | 5 | 503 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1asp_B | 0 | 28 | 497 | 5 | 503 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1asp_A | 0 | 28 | 497 | 5 | 503 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1aso_B | 0 | 28 | 497 | 5 | 503 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
