| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10016290m |
| Family | AA1 |
| Protein Properties | Length: 549 Molecular Weight: 60414.3 Isoelectric Point: 9.3236 |
| Chromosome | Chromosome/Scaffold: 3 Start: 3623785 End: 3626114 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 22 | 535 | 0 |
| ANIRRYKFNVVMKNITKLCSTKPIVTINGKFPGPTLYAREDDNVIVNLTNNVNYNVTIHWHGVKQLRTGWSDGPAYITQCPVQPGGTFVYNFTLTGQRGT LLWHAHISWLRATVHGAIVILPKRGVPYPFPRPHTEKIIVFGEWWKSDVEAVINQSTQSGLPPNISDAHTINGLTGRSGYTLHVKTGKKYLLRIINAAVN DELFFKIAGHNFTVVEVDASYTKPFNTDTLFLGPGQTTNAILTATHPPGNFLMTISPFMDTVVPVNNATGTALLRYKDTTTTQSLTSSKIPPINATSIAL GFSDSLRSLNSPDYPTKVPLKIDHSLFFTIGVGVNPCTTCINGTKTIADINNVSFVMPTVAMLQAHYFNKSEGVFTDDFPGRPLTPFNYTGGLNNLRTKK GTKVYRLEFNSTVQVIIQGTSVIAPESHPTHLHGSNFFVVGKGLGNFDPLEDPKKFNLIDPVERNTVSVPTAGWTAIRFRADNPGVWFFHCHLEVHTSWG LKMAFLVEDGKSSN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 549 Download |
| MATSCATILL IVFLSLQYLA EANIRRYKFN VVMKNITKLC STKPIVTING KFPGPTLYAR 60 EDDNVIVNLT NNVNYNVTIH WHGVKQLRTG WSDGPAYITQ CPVQPGGTFV YNFTLTGQRG 120 TLLWHAHISW LRATVHGAIV ILPKRGVPYP FPRPHTEKII VFGEWWKSDV EAVINQSTQS 180 GLPPNISDAH TINGLTGRSG YTLHVKTGKK YLLRIINAAV NDELFFKIAG HNFTVVEVDA 240 SYTKPFNTDT LFLGPGQTTN AILTATHPPG NFLMTISPFM DTVVPVNNAT GTALLRYKDT 300 TTTQSLTSSK IPPINATSIA LGFSDSLRSL NSPDYPTKVP LKIDHSLFFT IGVGVNPCTT 360 CINGTKTIAD INNVSFVMPT VAMLQAHYFN KSEGVFTDDF PGRPLTPFNY TGGLNNLRTK 420 KGTKVYRLEF NSTVQVIIQG TSVIAPESHP THLHGSNFFV VGKGLGNFDP LEDPKKFNLI 480 DPVERNTVSV PTAGWTAIRF RADNPGVWFF HCHLEVHTSW GLKMAFLVED GKSSNEKLPP 540 PPSDLPIC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 7.0e-65 | 9 | 526 | 554 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 2.0e-88 | 24 | 540 | 565 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 1.0e-88 | 8 | 539 | 566 | + oxidoreductase | ||
| TIGR03389 | laccase | 0 | 22 | 548 | 540 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA74103.1 | 0 | 7 | 548 | 8 | 555 | laccase [Populus trichocarpa] |
| EMBL | CAC14719.1 | 0 | 7 | 548 | 8 | 555 | laccase [Populus trichocarpa] |
| RefSeq | XP_002265173.1 | 0 | 9 | 548 | 8 | 553 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311202.1 | 0 | 8 | 548 | 9 | 556 | laccase [Populus trichocarpa] |
| RefSeq | XP_002316233.1 | 0 | 7 | 548 | 8 | 555 | laccase 3 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 22 | 526 | 1 | 521 | A Chain A, Peanut Peroxidase |
| PDB | 1asq_A | 0 | 22 | 526 | 1 | 521 | A Chain A, Peanut Peroxidase |
| PDB | 1asp_B | 0 | 22 | 526 | 1 | 521 | A Chain A, Peanut Peroxidase |
