Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016323m |
Family | GH35 |
Protein Properties | Length: 847 Molecular Weight: 93647.8 Isoelectric Point: 8.7805 |
Chromosome | Chromosome/Scaffold: 3 Start: 4604641 End: 4609291 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 41 | 343 | 0 |
TINGKRRILISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVKQSGLYLHLRIGPYVCAEWNFGGFPVWLKY IPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGAPGRSYTNWAAKMAVGLGTGVPWVMCKQDDAPDPIINACNGF YCDYFSPNKAYKPKMWTEAWTGWFTKFGGPVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLERQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 847 Download |
MGLKPNAMKN VAMVAVSALF LLGFLVCSVS GSVSYDSRAI TINGKRRILI SGSIHYPRST 60 PEMWPDLIRK AKEGGLDVIQ TYVFWNGHEP SPGKYYFEGN YDLVKFVKLV KQSGLYLHLR 120 IGPYVCAEWN FGGFPVWLKY IPGISFRTDN GPFKAQMQRF TTKIVNMMKA ERLFESQGGP 180 IILSQIENEY GPMEYELGAP GRSYTNWAAK MAVGLGTGVP WVMCKQDDAP DPIINACNGF 240 YCDYFSPNKA YKPKMWTEAW TGWFTKFGGP VPYRPAEDMA FSVARFIQKG GSFINYYMYH 300 GGTNFGRTAG GPFIATSYDY DAPLDEYGLE RQPKWGHLKD LHRAIKLCEP ALVSGEPTRM 360 PLGNYQEAHV YKSKSGACSA FLANYNPRSY AKVSFGNNHY NLPPWSISIL PDCKNTVYNT 420 ARVGAQTSRM KMVRVPVHGG LSWQAYNEDP STYIDESFTM VGLVEQINTT RDTSDYLWYM 480 TDVKIDNNEG FLRNGDLPTL TVLSAGHAMH VFINGHLSGS AYGSLDSPKL TFRKGVNLRA 540 GFNKIAILSI AVGLPNVGPH FETWNAGVLG PVSLNGLNGG RRDLSWQKWT YKVGLKGESL 600 SLHSLSGSSS VEWAEGAFVA QKQPLTWYKT TFSAPAGDSP LAVDMGSMGK GQIWINGQSL 660 GRHWPAYKAV GSCSECSYAG TFKEDKCLRN CGEASQRWYH VPRSWLKPSG NLLVVFEEWG 720 GDPNGISLVR REVDTVCADI YEWQSTLVNY QLHASGKVNK PLHPKVHLQC GPGQKITTVK 780 FASFGTPEGT CGSYRQGSCH AHHSYDAFNR LCVGQNWCSV TVAPAMFGGD PCPNVMKKLA 840 VEAVCA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-6 | 55 | 191 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-21 | 768 | 845 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-24 | 33 | 335 | 372 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 9.0e-164 | 39 | 345 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 19 | 846 | 833 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM13196.1 | 0 | 1 | 846 | 1 | 847 | galactosidase, putative [Arabidopsis thaliana] |
GenBank | ABK96254.1 | 0 | 1 | 846 | 1 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
RefSeq | NP_187988.1 | 0 | 1 | 846 | 1 | 847 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002327432.1 | 0 | 26 | 846 | 19 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 3 | 846 | 1 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.8026e-45 | 30 | 341 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.005 | 499 | 717 | 399 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1.99993e-41 | 32 | 415 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1.99993e-41 | 32 | 415 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |