y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016347m |
Family | AA1 |
Protein Properties | Length: 568 Molecular Weight: 62686.2 Isoelectric Point: 8.9657 |
Chromosome | Chromosome/Scaffold: 3 Start: 2865285 End: 2868571 |
Description | laccase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 23 | 552 | 0 |
AAIVEHTFNVQNLTVSRLCKRQVVTVVNGSLPGPTIRVKEGDSLVIHVLNNSPHNITIHWHGIFHRLTVWADGPSMITQCPIQPGHRYAYRFNITGQEGT LWWHAHSSFLRATVYGALVIRPKSGHSYPFPKPHKEVPILFGEWWNTDVVALEETAIATGVPPNNSDAYTINGLPGNLYPCSKDRMFSLNVVKGKRYLLR IINAAMNIQMFFKIANHRLTVVAADAVYTEPYVTDVITIAPGQTVDALLFADQSIDTSYYMAAHPYASAPGVPFPNTTTRGIIHYAGASKTRRTKRVLMP KLPAFFDTLTAHRFYSNLTSLVDGPHWVPVPRHVDEEMLVTIGLGLEACADNTTCPKFSASMSNHSFVLPKKLSILEAVFHGVDGIFTPDFPDQPPVKFD YTNPNITQTNPGLLFTQKTTSAKVLKFNTTVELVLQNHALIAAENHPMHLHGFNFHVLAQGFGNYDAKRDRSKFNLVNPQFRNTLAVPVGGWAVTRFTAN NPGAWIMHCHIDVHLPFGLGMIFVVENGPT |
Full Sequence |
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Protein Sequence Length: 568 Download |
MEGVRVLLAC ALLLFAVSSI ASAAIVEHTF NVQNLTVSRL CKRQVVTVVN GSLPGPTIRV 60 KEGDSLVIHV LNNSPHNITI HWHGIFHRLT VWADGPSMIT QCPIQPGHRY AYRFNITGQE 120 GTLWWHAHSS FLRATVYGAL VIRPKSGHSY PFPKPHKEVP ILFGEWWNTD VVALEETAIA 180 TGVPPNNSDA YTINGLPGNL YPCSKDRMFS LNVVKGKRYL LRIINAAMNI QMFFKIANHR 240 LTVVAADAVY TEPYVTDVIT IAPGQTVDAL LFADQSIDTS YYMAAHPYAS APGVPFPNTT 300 TRGIIHYAGA SKTRRTKRVL MPKLPAFFDT LTAHRFYSNL TSLVDGPHWV PVPRHVDEEM 360 LVTIGLGLEA CADNTTCPKF SASMSNHSFV LPKKLSILEA VFHGVDGIFT PDFPDQPPVK 420 FDYTNPNITQ TNPGLLFTQK TTSAKVLKFN TTVELVLQNH ALIAAENHPM HLHGFNFHVL 480 AQGFGNYDAK RDRSKFNLVN PQFRNTLAVP VGGWAVTRFT ANNPGAWIMH CHIDVHLPFG 540 LGMIFVVENG PTKATSLPPP PLDLPKC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-49 | 31 | 147 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 4.0e-61 | 27 | 546 | 550 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 6.0e-70 | 41 | 545 | 533 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-80 | 27 | 545 | 551 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 28 | 567 | 544 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_187533.1 | 0 | 1 | 550 | 1 | 550 | LAC7 (laccase 7); laccase [Arabidopsis thaliana] |
RefSeq | XP_002308196.1 | 0 | 8 | 567 | 8 | 562 | laccase 110a [Populus trichocarpa] |
RefSeq | XP_002322939.1 | 0 | 18 | 567 | 17 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333273.1 | 0 | 18 | 567 | 17 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527888.1 | 0 | 30 | 567 | 2 | 540 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 23 | 554 | 1 | 535 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1asq_A | 0 | 23 | 554 | 1 | 535 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1asp_B | 0 | 23 | 554 | 1 | 535 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1asp_A | 0 | 23 | 554 | 1 | 535 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1aso_B | 0 | 23 | 554 | 1 | 535 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |