Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016706m |
Family | GT47 |
Protein Properties | Length: 797 Molecular Weight: 91228.7 Isoelectric Point: 6.2105 |
Chromosome | Chromosome/Scaffold: 5 Start: 11616808 End: 11621385 |
Description | exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 348 | 701 | 0 |
KKRPLIYIYDLPPDFNSLLLEGRHFKLECVNRIYDERNATVWTDYLYGSQMAFYENILATGHRTLNGEEADFFFVPVLDSCIITRADDAPHFNMKNHSRL RSSFTLEFYKRAYEHIVEKYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYRDDNWDSISDERRGDHPCFDPRKDLVIPA WKLPDPYSVRANYWARPREKRKTLFYFNGNLGPAYAEGRPEDSYSMGIRQKLAEEFGSSPNREGKLGKQHTEDVIVTPLRSDNYHKDISNSIFCGAFPGD GWSGRMEDSILQGCVPVIIQDGIYLPYENMLNYESFAVRVSEDDIPNLINTLRG |
Full Sequence |
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Protein Sequence Length: 797 Download |
MKTMLSHQKW NFSWSQIAIV ASVIVLVSLV HLFLGPVLPS FDTVSVRQAQ NLSGPSNESI 60 TQVTEDSTSE SVLAAFDRRF PADSHGAVVY RNASWKAEIG QWLSSCDAVA KEVDIIEPIG 120 GRKCLSDCSG QGVCNHEFGI CRCFHGFTGQ DCSQKQRLEC NYEKTPEMPY GPWVVSICST 180 HCDTTRAMCF CGEGTKYPNR PVPESCGFQS NSPANPDEPK MTDWSKPDLD ILTTNSSKQG 240 WCNVDPEDAY ALKVQIKEEC DCKYDCLWGR FCEIPVQCTC VNQCSGHGKC RGGFCQCDKG 300 WFGTDCSIPS TLSTVGEWPQ WLRPAHLEVP SDKEVPGNII NLSAVVKKKR PLIYIYDLPP 360 DFNSLLLEGR HFKLECVNRI YDERNATVWT DYLYGSQMAF YENILATGHR TLNGEEADFF 420 FVPVLDSCII TRADDAPHFN MKNHSRLRSS FTLEFYKRAY EHIVEKYPYW NRTSGRDHIW 480 FFSWDEGACY APKEIWNSMM LVHWGNTNSK HNHSTTAYRD DNWDSISDER RGDHPCFDPR 540 KDLVIPAWKL PDPYSVRANY WARPREKRKT LFYFNGNLGP AYAEGRPEDS YSMGIRQKLA 600 EEFGSSPNRE GKLGKQHTED VIVTPLRSDN YHKDISNSIF CGAFPGDGWS GRMEDSILQG 660 CVPVIIQDGI YLPYENMLNY ESFAVRVSED DIPNLINTLR GFSETEIQFR LANVKKLWQR 720 FLFRDSILLE AERQKASYGH EEDWAVQFSK LKHDDIFATF IQTLHFKLHN DPWRREQVIN 780 RTKEYGLPQE CLHRTS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07974 | EGF_2 | 9.0e-5 | 278 | 306 | 31 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
pfam03016 | Exostosin | 1.0e-66 | 347 | 702 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB41192.1 | 0 | 4 | 796 | 1 | 736 | putative protein [Arabidopsis thaliana] |
EMBL | CBI29877.1 | 0 | 8 | 795 | 34 | 821 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191322.3 | 0 | 4 | 796 | 1 | 793 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | NP_974452.1 | 0 | 4 | 796 | 1 | 791 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002277596.1 | 0 | 8 | 795 | 6 | 793 | PREDICTED: hypothetical protein [Vitis vinifera] |