| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10016857m |
| Family | GH3 |
| Protein Properties | Length: 613 Molecular Weight: 67101.7 Isoelectric Point: 5.4198 |
| Chromosome | Chromosome/Scaffold: 5 Start: 7451780 End: 7454562 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH3 | 87 | 322 | 0 |
| LESRLGIPIIYGIDAVHGNNDVYGATIFPHNIGLGATRDVDLVRRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYESYGEVAQIVSEMTSLVSGLQ GEPPKEHTNGYPFLAGRKNVVACAKHFVGDGGTNKAINEGNTILPYKDLERKHIAPYKKCISQGLSTVMASYSSWNGDKLHSHHFLLTEVLKQKLGFKGY VVSDWEGLDRLSDPPGSNYRNCVKMGINAGIDMVMV | |||
| Full Sequence |
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| Protein Sequence Length: 613 Download |
| MVDNEKSCVY KNRDAPVEAR VKDLLSQMTL PEKVGQMTLI ECSVASQAVI KDYSIGGLLN 60 RAGNWPFEDA KSSYWADMID GFQRSALESR LGIPIIYGID AVHGNNDVYG ATIFPHNIGL 120 GATRDVDLVR RIGAATALEV RACGAHWAFA PCVAVVKDPR WGRCYESYGE VAQIVSEMTS 180 LVSGLQGEPP KEHTNGYPFL AGRKNVVACA KHFVGDGGTN KAINEGNTIL PYKDLERKHI 240 APYKKCISQG LSTVMASYSS WNGDKLHSHH FLLTEVLKQK LGFKGYVVSD WEGLDRLSDP 300 PGSNYRNCVK MGINAGIDMV MVPFKYEKFT NDLIDLVESG EVSMARIDDA VERILRVKFV 360 AGLFEYSLAD RTLLPTVGCK EHRELAREAV RKSLVLLKNG KYARFLPLNC NAERILVVGT 420 HADDLGYQCG GWTKTMYGQS GRITNGTTLL DAIKATVGDE TEVIYEKTPS EETLAARKSF 480 SYAIVAVGEL PYAETMGDNS ELIIPLNGSE IITAVAEKIP TLVILFSGRP MFLEPQVLEK 540 AEALVAAWLP GTEGQGMADV IFGDYEFQGK LPASWFKSVD QLPLDIESNG YLPLFPLGFG 600 LGHDSVENSN TV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 3.0e-42 | 12 | 585 | 610 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-45 | 394 | 583 | 203 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 3.0e-83 | 28 | 462 | 444 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| PRK15098 | PRK15098 | 7.0e-85 | 18 | 583 | 637 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-85 | 29 | 357 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY25449.1 | 0 | 28 | 601 | 1 | 576 | At3g47010 [Arabidopsis thaliana] |
| RefSeq | NP_190284.1 | 0 | 1 | 606 | 1 | 608 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | NP_190285.3 | 0 | 5 | 601 | 6 | 604 | hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_190288.1 | 0 | 1 | 608 | 1 | 635 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | NP_190289.1 | 0 | 1 | 612 | 1 | 612 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1iex_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1iew_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1iev_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1ieq_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX132989 | 299 | 56 | 354 | 0 |
| DY265467 | 356 | 136 | 487 | 0 |
| HO784016 | 426 | 56 | 478 | 0 |
| EL455042 | 312 | 63 | 374 | 0 |
| HO784016 | 47 | 10 | 56 | 0.001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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