Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016871m |
Family | GH3 |
Protein Properties | Length: 606 Molecular Weight: 65570.4 Isoelectric Point: 4.9175 |
Chromosome | Chromosome/Scaffold: 5 Start: 7431360 End: 7434195 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 84 | 319 | 0 |
LASRLGIPIIYGTDAVHGNNNVYGATVFPHNIGLGATRDADLVRRIGAATAVEVRASGVHWTYAPCVAVLGDPRWGRCYESYGEAANIVCEMSSLISGLQ GEAPEEHPNGYPFVAGRNNVVACAKHFVGDGGTDKGLSEGNTIASYEELEKIHVAPYLNCIAQGVSTVMASFSSWNGSRLHSDYFLLTEVLKQKLGFKGF LVSDWDGLETISEPQGSNHRNCVKLGINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 606 Download |
MSLHGVYKNR DAPVEARVKD LLTRMTLPEK IGQMTQIERS VASPQVIKDS FIGSVQSGAG 60 SWPFEDAKSS DWADMIDGFQ RLALASRLGI PIIYGTDAVH GNNNVYGATV FPHNIGLGAT 120 RDADLVRRIG AATAVEVRAS GVHWTYAPCV AVLGDPRWGR CYESYGEAAN IVCEMSSLIS 180 GLQGEAPEEH PNGYPFVAGR NNVVACAKHF VGDGGTDKGL SEGNTIASYE ELEKIHVAPY 240 LNCIAQGVST VMASFSSWNG SRLHSDYFLL TEVLKQKLGF KGFLVSDWDG LETISEPQGS 300 NHRNCVKLGI NAGIDMVMVP FKYEQFIQDM TDLVESGEIP MARVNDAVER ILRVKFVAGL 360 FEHPLADRSL LGTVGCKEHR EVAREAVRKS LVLLKNGTNA NTPFLPLDRN AKRILVVGMH 420 ANDIGNQCGG WTKIKSGQSG RITIGTTLLD AIKEAVGDKT EVIYEETPTE ETLASSESFS 480 YAIVAVGEPP YAEMKGDNSE LTIPFNGNDI ITAVAEKIPS LVILFSGRPM VLEPTVLEKT 540 DALVAAWFPG TEGQGIADVI FGDYDFNGKL PVSWFKRVDQ LPLNADANSY DPLFPLGFGL 600 TCNSG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-44 | 9 | 590 | 633 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-53 | 391 | 601 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 5.0e-81 | 26 | 354 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 4.0e-83 | 25 | 451 | 439 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 8.0e-88 | 15 | 601 | 654 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25449.1 | 0 | 25 | 605 | 1 | 581 | At3g47010 [Arabidopsis thaliana] |
RefSeq | NP_190284.1 | 0 | 6 | 600 | 9 | 603 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190285.3 | 0 | 6 | 605 | 10 | 609 | hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_190288.1 | 0 | 6 | 604 | 9 | 632 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190289.1 | 0 | 6 | 604 | 9 | 605 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 6 | 604 | 4 | 601 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1iex_A | 0 | 6 | 604 | 4 | 601 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1iew_A | 0 | 6 | 604 | 4 | 601 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1iev_A | 0 | 6 | 604 | 4 | 601 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1ieq_A | 0 | 6 | 604 | 4 | 601 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX132989 | 299 | 53 | 351 | 0 |
EX134175 | 297 | 310 | 606 | 0 |
DY265467 | 325 | 133 | 457 | 0 |
HO784016 | 426 | 53 | 477 | 0 |
HO784016 | 48 | 7 | 54 | 0.0000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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