Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016881m |
Family | CE8 |
Protein Properties | Length: 603 Molecular Weight: 65799.6 Isoelectric Point: 9.3015 |
Chromosome | Chromosome/Scaffold: 5 Start: 8292019 End: 8296244 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 288 | 584 | 0 |
DIIVSKDGNGTCKTISEAIKKAPQNSTRRTIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENW AGPAKHQAVALRVGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDLQKNTITAQNRKDPNQNTGISIHASRV LATSDLQTTNGSIQTYLGRPWKLFSRTVYMMTYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVKWPGYRVINSTAEANRFTVAEFIY |
Full Sequence |
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Protein Sequence Length: 603 Download |
MGYERLGPSG ATTGSVTTST TNTTAPILTQ VSTSSQPQNN HRRSKKKLVV SSIVLAIALI 60 LAAAIFAGVR SRLKLSESVP GLARKPSQAI SKACGLTRFP DLCVDSLLDF PGSLAASSSK 120 DLIHVTVNMT LHHFSHALYS STSFSFVDMP PRARSAYDAC VELLDDSVDA LSRALSSVVS 180 SSAKSQDVTT WLSAALTNHD TCTEGFDDVD DGKVKDQMTA ALKNLSELVS NCLAIFSASH 240 EGDDFAGVPI QNRRLLGVAE EKDEKFPRWM RRREREILEM PVSQIQADII VSKDGNGTCK 300 TISEAIKKAP QNSTRRTIIY VKAGRYEENN LKVGRKKINL MFVGDGKGKT VISGGKSIFD 360 NITTFHTASF AATGAGFIAR DITFENWAGP AKHQAVALRV GADHAVIYRC NIIGYQDTLY 420 VHSNRQFFRE CDIYGTVDFI FGNAAVVLQN CSIYARKPMD LQKNTITAQN RKDPNQNTGI 480 SIHASRVLAT SDLQTTNGSI QTYLGRPWKL FSRTVYMMTY IGGHVHTRGW LEWNTTFALD 540 TLYYGEYLNS GPGSGLGQRV KWPGYRVINS TAEANRFTVA EFIYGSSWLP STGVSFLAGL 600 SI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 3.0e-160 | 190 | 602 | 419 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 5.0e-162 | 90 | 601 | 518 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-170 | 190 | 600 | 411 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 30 | 602 | 575 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 288 | 586 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 82 | 602 | 81 | 617 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_190491.1 | 0 | 1 | 602 | 1 | 598 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 84 | 602 | 70 | 597 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 84 | 600 | 31 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 1 | 602 | 1 | 605 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 283 | 600 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 285 | 600 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 7e-20 | 292 | 530 | 12 | 279 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-20 | 292 | 530 | 12 | 279 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 7e-20 | 292 | 530 | 12 | 279 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |