Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016896m |
Family | CE8 |
Protein Properties | Length: 594 Molecular Weight: 65618.4 Isoelectric Point: 10.4094 |
Chromosome | Chromosome/Scaffold: 5 Start: 7514135 End: 7516390 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 280 | 577 | 0 |
LVVSRDRSGHFRSIQAAINFAARRRFKSRFVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIVTSGRSVQHGYTTYNSATAGFGGQRFVAKDMTFINTA GPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRII AASDLRPVIRSYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVSSLIA |
Full Sequence |
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Protein Sequence Length: 594 Download |
MLRGIFHICL LASFLLLPFS FAVHDSGFTG GTDAPPPWDH NVSTPPETAP SPTPTSSSPT 60 ASPPPSPGPM APPAPTNNGS VSGNMTWWCD KTPHAETCNY YFMKSSQNNI NRPPRFRSEF 120 LRMLVKIALD QAVITHSQTV KFGPSCTNNQ RKAAWSDCVN LFQNTVAQLN RTLKGLNPAA 180 PNDVKCTDFD AQTWLSTAQT NIETCRSGSE DLNVSDFVMP AISNKNLSDL IGNCLAVNGV 240 LMKQHNHTTA NHKEYFPSWV SRHERRLLVS ASLAKSRPHL VVSRDRSGHF RSIQAAINFA 300 ARRRFKSRFV IYVKKGVYRE NIDVGNDNHN IMLVGDGERK TIVTSGRSVQ HGYTTYNSAT 360 AGFGGQRFVA KDMTFINTAG PLRGQAVAVR SSSDLSVFYR VGIHGFQDTL YIHSQRQFFR 420 ECYISGTIDF IFGNAAVVFQ NCMILVRRPL HGQANIITAQ GRGDPFQNTG ITIHSSRIIA 480 ASDLRPVIRS YKTYLGRPWQ AYSRVTIMKT YIDNSISPLG WSPWLRGSNF ALNTVFYGEY 540 KNFGPGSSTR WRVRWKGFHA ITSTAVASRF TVSSLIAGGS WLPATGVPFK SGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-145 | 152 | 593 | 463 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 6.0e-147 | 77 | 593 | 528 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 8.0e-150 | 147 | 593 | 451 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-160 | 279 | 578 | 300 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 0 | 82 | 593 | 515 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_190324.1 | 0 | 1 | 593 | 1 | 594 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199962.1 | 0 | 84 | 593 | 33 | 536 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002318284.1 | 0 | 80 | 593 | 25 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322402.1 | 0 | 80 | 593 | 25 | 524 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 84 | 593 | 30 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 278 | 593 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 281 | 593 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-21 | 279 | 583 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-21 | 279 | 583 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-21 | 279 | 583 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |