y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10016921m |
Family | GH1 |
Protein Properties | Length: 581 Molecular Weight: 67277.5 Isoelectric Point: 6.2823 |
Chromosome | Chromosome/Scaffold: 5 Start: 12512867 End: 12516864 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 30 | 505 | 0 |
HSFPDGFIFGTAASAFQYEGATNEGGKSPTIWDHFSRTYPERTKMHNADVAIDFYHRYKDDIKLMKELNMDAFRFSISWSRLIPSGKLKDGVNKEGVQFY KDLIDELLANDIQPSMTLYHWDHPQTLEDEYGGFLSPKIVEDFRDFARTCFEEFGDKVKMWTTINEPYIMTVAGYDQGNKAAGRCSKWVDEKCHAGDSST EPYIVSHHTLLAHAAAVEEFRKCKQISHDSQIGIVLSPRWFEPYHSNSVDDIEAAERTLAFEIGWHLDPVIHGDYPEIVKRYAGDKLPSFTEEQSKMLKN SSDFVGVNYYTARFATHMPHIDPEKPRFKTDHHVEWKITNHSGHIIGLGEERGLLLSYPEGLRKVLNYIKDKYNNMPVYIKENGINDNDDGTKPREEILK DTFRIEYHTTHFEELHKAIVEDGCDVRGYYAWSLMDNFEWEHGYTARFGLYYVDFVNGLKRYPKDSVKWFKRFLKR |
Full Sequence |
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Protein Sequence Length: 581 Download |
MGRDRSSFII ILSTISLLAN TITSLKLGRH SFPDGFIFGT AASAFQYEGA TNEGGKSPTI 60 WDHFSRTYPE RTKMHNADVA IDFYHRYKDD IKLMKELNMD AFRFSISWSR LIPSGKLKDG 120 VNKEGVQFYK DLIDELLAND IQPSMTLYHW DHPQTLEDEY GGFLSPKIVE DFRDFARTCF 180 EEFGDKVKMW TTINEPYIMT VAGYDQGNKA AGRCSKWVDE KCHAGDSSTE PYIVSHHTLL 240 AHAAAVEEFR KCKQISHDSQ IGIVLSPRWF EPYHSNSVDD IEAAERTLAF EIGWHLDPVI 300 HGDYPEIVKR YAGDKLPSFT EEQSKMLKNS SDFVGVNYYT ARFATHMPHI DPEKPRFKTD 360 HHVEWKITNH SGHIIGLGEE RGLLLSYPEG LRKVLNYIKD KYNNMPVYIK ENGINDNDDG 420 TKPREEILKD TFRIEYHTTH FEELHKAIVE DGCDVRGYYA WSLMDNFEWE HGYTARFGLY 480 YVDFVNGLKR YPKDSVKWFK RFLKRSVGET KEEDEAKEMS CKKSRAKVNK TLYEQSAGFF 540 VSFMAANQSR REEETNRCSF DYPYNHFGVL QEIENPSSFY * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 6.0e-136 | 29 | 504 | 483 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 3.0e-139 | 29 | 507 | 483 | + beta-glucosidase | ||
COG2723 | BglB | 2.0e-147 | 32 | 500 | 474 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 8.0e-149 | 33 | 499 | 473 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 5.0e-176 | 31 | 505 | 478 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC16092.1 | 0 | 8 | 579 | 5 | 572 | putative beta-glucosidase [Arabidopsis thaliana] |
GenBank | AAG23719.1 | 0 | 6 | 580 | 5 | 577 | beta-glucosidase [Arabidopsis thaliana] |
RefSeq | NP_001118524.1 | 0 | 10 | 579 | 7 | 590 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_191573.1 | 0 | 6 | 580 | 5 | 577 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_850416.1 | 0 | 8 | 579 | 5 | 577 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 20 | 503 | 22 | 503 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 3ptq_A | 0 | 20 | 503 | 22 | 503 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 3ptm_B | 0 | 20 | 503 | 22 | 503 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 3ptm_A | 0 | 20 | 503 | 22 | 503 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 3ptk_B | 0 | 20 | 503 | 22 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM391838 | 269 | 36 | 304 | 0 |
AM391780 | 254 | 51 | 304 | 0 |
FD533594 | 229 | 27 | 255 | 0 |
AM391791 | 223 | 27 | 249 | 0 |
EX095686 | 221 | 27 | 247 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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