| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10016955m |
| Family | GH5 |
| Protein Properties | Length: 555 Molecular Weight: 62916 Isoelectric Point: 9.1445 |
| Chromosome | Chromosome/Scaffold: 5 Start: 1627441 End: 1631284 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 31 | 346 | 5.74532e-44 |
| IVDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQPMDSIAEKIVSMGFNCVRLTWPLYLATDESFSDIMTVRQSLLKFGLFEAVSGFQVHNPTVLDLPLIK AFQEVVACLGKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKGLKKMASMFASNVSSNVVGMSLRNELRGPKQNIKDWYMYMKKGAEAVHSI NPDVLVIVSGLNYATDLSFLRDKPFEVSFRRKLVFEIHWYGFWNSWEGDSLNKICGRETENLMKMSGFLLEKGFPLFVSEFGIDQRGSNANDNKFLSCFM ALAADLDVDWALWTLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 555 Download |
| MERFFFISLF LLLLFVTTTF ALPLSTDSRW IVDDGNKGRR VKLTCVNWPS HLETAVAEGL 60 SKQPMDSIAE KIVSMGFNCV RLTWPLYLAT DESFSDIMTV RQSLLKFGLF EAVSGFQVHN 120 PTVLDLPLIK AFQEVVACLG KHRVMVILDN HISQPGWCCS DNDGNGFFGD KHLNPQVWIK 180 GLKKMASMFA SNVSSNVVGM SLRNELRGPK QNIKDWYMYM KKGAEAVHSI NPDVLVIVSG 240 LNYATDLSFL RDKPFEVSFR RKLVFEIHWY GFWNSWEGDS LNKICGRETE NLMKMSGFLL 300 EKGFPLFVSE FGIDQRGSNA NDNKFLSCFM ALAADLDVDW ALWTLAGSYY IRDKTIGSDE 360 TYGVLDWDWS SIRNSTILQM ISAIQTPFTG PGLMETQPKK IMFHPSSGLC IVRKSLFQLK 420 LGSCNRSESW KLSSHQVLSL TEERILCLKA YEKGKAVKLR LFFSDFHCSK WKLLSDSKMQ 480 LLSVTKNGTI VCLDVDSYSK IVMRSCKCLQ GNSSCDPRSQ WFKLVTSSRR RSKSKPFIQI 540 SPYSKTFLQK ALSV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 3.0e-13 | 62 | 323 | 270 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02432.1 | 0 | 1 | 554 | 9 | 561 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189244.1 | 0 | 1 | 554 | 1 | 551 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002312657.1 | 0 | 21 | 552 | 9 | 541 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315653.1 | 0 | 20 | 535 | 1 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515055.1 | 0 | 21 | 541 | 31 | 547 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ece_B | 0.00000000001 | 26 | 372 | 8 | 339 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00000000001 | 26 | 372 | 8 | 339 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1vrx_B | 0.00000000007 | 26 | 372 | 8 | 339 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000000007 | 26 | 372 | 8 | 339 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 3pzv_D | 0.0003 | 103 | 346 | 84 | 289 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
