Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10017004m |
Family | CE8 |
Protein Properties | Length: 530 Molecular Weight: 57608.7 Isoelectric Point: 9.4707 |
Chromosome | Chromosome/Scaffold: 5 Start: 12092555 End: 12094834 |
Description | pectin methylesterase 61 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 229 | 513 | 0 |
AVVAADGSGTHMTVAEALASLEKGSGRSVIHLAAGTYKENLNIPTKQKNVMLVGDGKGKTVVVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGP NAEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDVTGTVDFIFGNAAVVFQSCNLVSRKGSSEQNYVTAQGRSDPNQNTGISIHNCRITGSI GTYLGRPWKQYSRTVVMQSFLDGSIHPSGWSAWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDG |
Full Sequence |
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Protein Sequence Length: 530 Download |
MATSLFSSPN HKFRIKILFF LILNLLSLHT LVFAHSSNSK FTKFTRHPNS DSSSRTKPSP 60 SSNKGFHNSV QLSLDHARLA RSLALNLTLS HRTSQTLMLD PVNDCLELLD DTLDMLSRIV 120 VIQREDQVNN DVHTWLSAAL TNQETCKQSL SEKSSYNKEG IAMDSFARKL TGSLTNSLDM 180 FMSDKRKSSS SAVVVSGRKL LSDHEFPTWV SSSDRKLLEA SVEELRPHAV VAADGSGTHM 240 TVAEALASLE KGSGRSVIHL AAGTYKENLN IPTKQKNVML VGDGKGKTVV VGSRSNRGGW 300 NTYQSATVAA MGDGFIARDI TFVNSAGPNA EQAVALRVGS DRSVVYRCSI DGYQDSLYTL 360 SKRQFYRETD VTGTVDFIFG NAAVVFQSCN LVSRKGSSEQ NYVTAQGRSD PNQNTGISIH 420 NCRITGSIGT YLGRPWKQYS RTVVMQSFLD GSIHPSGWSA WSSNFALKTL YYGEFGNSGP 480 GSSVSGRVSW AGYHPALTLT EAQGFTVSGF IDGKSWLPST GVVFDSGLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-127 | 89 | 528 | 467 | + pectinesterase | ||
PLN02484 | PLN02484 | 1.0e-135 | 67 | 528 | 483 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-144 | 104 | 528 | 438 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-160 | 228 | 513 | 297 | + Pectinesterase. | ||
PLN02170 | PLN02170 | 0 | 2 | 529 | 530 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK69695.1 | 0 | 66 | 529 | 51 | 549 | putative pectin methylesterase LuPME1 [Linum usitatissimum] |
EMBL | CBI39447.1 | 0 | 136 | 529 | 38 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181833.1 | 0 | 10 | 529 | 9 | 517 | ATPMEPCRD; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_191460.1 | 0 | 1 | 529 | 1 | 529 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002527752.1 | 0 | 66 | 529 | 99 | 582 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 228 | 528 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 227 | 528 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-19 | 228 | 485 | 5 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-19 | 228 | 485 | 5 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-19 | 228 | 485 | 5 | 314 | A Chain A, Pectin Methylesterase From Carrot |