Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10017009m |
Family | CE8 |
Protein Properties | Length: 528 Molecular Weight: 57535.5 Isoelectric Point: 8.9433 |
Chromosome | Chromosome/Scaffold: 5 Start: 5379269 End: 5382652 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 215 | 510 | 0 |
AVVAADGTGNFKTISDAVLAAPEYSKKRYVIHVKGGVYAENVEIKKKKWNIMMVGDGIDVTVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAG PEKHQAVALRSDTDLGVYYRCAMKGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAIFQNCQIKAKQGLPNQKNSITAQGRKDPNEPSGFTIQFSNITA DTDLVPHLSTTATYLGRPWKLYSRTVFMQNYISDALRPEGWLEWSGDFALDTLYYGEYMNTGPGASLDRRVKWPGYHVLNNSTEANNFTVAQFIQG |
Full Sequence |
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Protein Sequence Length: 528 Download |
MAKFPQVGAS ILLLFLTIIS LCSAHKVVSS KGLVQIECLR VPSSEFAEAA KTVIDAIKKA 60 GDIVSKFDKK IGKSRVSNAI LDCVDLLDSA AEELSWIISA CLNPNGKDNS TGDLGSDLRT 120 WISAALSDQD TCLDGFEGTN GFIRKVVAGG LNRVSSTVRN LLTMVHSPPS KPKSKPMKAH 180 TTTTIHSGFS KFPSWVKPGD RKLLQTDGSQ VAADAVVAAD GTGNFKTISD AVLAAPEYSK 240 KRYVIHVKGG VYAENVEIKK KKWNIMMVGD GIDVTVITGN RSFIDGWTTF RSATFAVSGR 300 GFIARDITFQ NTAGPEKHQA VALRSDTDLG VYYRCAMKGY QDTLYAHSMR QFFRECIITG 360 TVDFIFGDAT AIFQNCQIKA KQGLPNQKNS ITAQGRKDPN EPSGFTIQFS NITADTDLVP 420 HLSTTATYLG RPWKLYSRTV FMQNYISDAL RPEGWLEWSG DFALDTLYYG EYMNTGPGAS 480 LDRRVKWPGY HVLNNSTEAN NFTVAQFIQG NLWLPSTGVT YIAGLGS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 3.0e-173 | 74 | 525 | 455 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 7.0e-174 | 56 | 525 | 470 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 29 | 525 | 497 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 221 | 511 | 291 | + Pectinesterase. | ||
PLN02506 | PLN02506 | 0 | 40 | 527 | 488 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42041.1 | 0 | 34 | 527 | 32 | 509 | pectin methylesterase 4 [Pyrus communis] |
EMBL | CBI29628.1 | 0 | 33 | 526 | 38 | 526 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189913.3 | 0 | 1 | 527 | 1 | 527 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_567917.4 | 0 | 13 | 525 | 7 | 523 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43062 | 0 | 34 | 526 | 44 | 521 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 211 | 525 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 207 | 525 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-23 | 225 | 484 | 18 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-23 | 225 | 484 | 18 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-23 | 225 | 484 | 18 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |