| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10017514m |
| Family | CE10 |
| Protein Properties | Length: 359 Molecular Weight: 40323 Isoelectric Point: 7.6112 |
| Chromosome | Chromosome/Scaffold: 5 Start: 13540473 End: 13542596 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 73 | 335 | 0 |
| TNLLTRIYQPASLFLHLPPGSVNLTLPLSTTDIVPVLVFFHGGSFTHSSANSAIYDTFCRRLVTLCRVVVVSVDYRRSPEHRFPCAYDDGWNALKWVKSR VWLQSGLDSSVYVFLAGDSSGGNIAHNVALRATREGLQVLGNILLHPMFGGQDRTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQN LKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLME | |||
| Full Sequence |
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| Protein Sequence Length: 359 Download |
| MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANAFPV 60 DGVFSFDHVH SPTNLLTRIY QPASLFLHLP PGSVNLTLPL STTDIVPVLV FFHGGSFTHS 120 SANSAIYDTF CRRLVTLCRV VVVSVDYRRS PEHRFPCAYD DGWNALKWVK SRVWLQSGLD 180 SSVYVFLAGD SSGGNIAHNV ALRATREGLQ VLGNILLHPM FGGQDRTQSE KTLDGKYFVT 240 IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QNLKGVNFPK SLVVVAGLDL VQDWQLAYVD 300 GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSHCR SSPLLLTP* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10162 | PRK10162 | 7.0e-8 | 108 | 298 | 196 | + acetyl esterase; Provisional | ||
| COG0657 | Aes | 1.0e-26 | 107 | 325 | 222 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 8.0e-63 | 109 | 323 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG89394.1 | 0 | 1 | 342 | 1 | 341 | gibberellic acid receptor [Gossypium hirsutum] |
| GenBank | ABQ96123.1 | 0 | 1 | 343 | 1 | 342 | gibberellic acid receptor-b [Gossypium hirsutum] |
| GenBank | ACN86356.1 | 0 | 1 | 342 | 1 | 341 | GID1-1 [Gossypium hirsutum] |
| RefSeq | NP_191860.1 | 0 | 1 | 358 | 1 | 358 | GID1B (GA INSENSITIVE DWARF1B); hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002302813.1 | 0 | 1 | 343 | 1 | 342 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2zsi_A | 0 | 1 | 343 | 8 | 350 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 2zsh_A | 0 | 1 | 343 | 8 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 0 | 2 | 343 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_E | 0 | 2 | 343 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_D | 0 | 2 | 343 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO779605 | 343 | 1 | 343 | 0 |
| DT574934 | 322 | 19 | 340 | 0 |
| ES913054 | 285 | 4 | 286 | 0 |
| HO795605 | 341 | 2 | 341 | 0 |
| ES790010 | 344 | 1 | 343 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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