| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10018370m |
| Family | GH27 |
| Protein Properties | Length: 413 Molecular Weight: 45680.7 Isoelectric Point: 4.6562 |
| Chromosome | Chromosome/Scaffold: 5 Start: 11124017 End: 11126901 |
| Description | Melibiase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 242 | 343 | 6.6e-31 |
| AAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAINQDPLGVQGRKIQANGDDNCQQVWSGPLTGDRMV IA | |||
| GH27 | 138 | 237 | 2.6e-32 |
| FTCQVRPGSLYHEVDDADIFASWGVDYLKYDNCFNLGIKPIKRYPPMRDALNATGRSIFYSLCEWGVDDPALWAKEVGNSWRTTDDINDTWASMTTIADL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 413 Download |
| MAIVNKMKDS VLFLVWLFSL SVLVSQSIAG RVKAPLLQSN PGGLVFSKSF NSIYDTSMYG 60 RLQLNNGLAR TPQMGWNSWN FFACNINETV IKETADALVS SGLADLGYIH VNIGIKLLAD 120 YVHSKGLKLG IYSDAGIFTC QVRPGSLYHE VDDADIFASW GVDYLKYDNC FNLGIKPIKR 180 YPPMRDALNA TGRSIFYSLC EWGVDDPALW AKEVGNSWRT TDDINDTWAS MTTIADLNNK 240 WAAYAGPGGW NDPDMLEVGN GGMTYEEYRG HFSIWALMKA PLLIGCDVRN MTAETFEILS 300 NKEVIAINQD PLGVQGRKIQ ANGDDNCQQV WSGPLTGDRM VIALWNRCSE PATITASWDL 360 IGLESTISVS VRDLWQHKDV TDNASVSFEA QVDAHDCHMY VLTPQTESHS DV* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02899 | PLN02899 | 1.0e-18 | 57 | 308 | 366 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 4.0e-159 | 55 | 404 | 375 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 5.0e-180 | 61 | 405 | 370 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 26 | 412 | 411 | + alpha-galactosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB87430.1 | 0 | 4 | 412 | 1 | 434 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_191190.2 | 0 | 1 | 412 | 1 | 437 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | NP_974447.1 | 0 | 1 | 412 | 1 | 413 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002279730.1 | 0 | 7 | 412 | 2 | 427 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325481.1 | 0 | 49 | 404 | 1 | 380 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 64 | 404 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 65 | 399 | 2 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 64 | 406 | 1 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 64 | 406 | 1 | 388 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3lrl_A | 0 | 66 | 387 | 24 | 407 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
