| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10018761m |
| Family | GH17 |
| Protein Properties | Length: 379 Molecular Weight: 42323.3 Isoelectric Point: 9.2888 |
| Chromosome | Chromosome/Scaffold: 5 Start: 10930050 End: 10931186 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 28 | 350 | 0 |
| IGVTYSTPGSISGTVQLSPDRIAAKVVSMKIPAVRLLDSNPAMIRAFAYTNVSLFLSVPNPLVPLLASNRSLAMRWVYRHVLPFHPRTKISIISVGNDVI SYSPDVSPFLLRAMHNVHQSLVDLRIYKISVSTTFSFFNIVPTAFPPSSAQFQQPNGEVIIRPILQFLERTNSSFLINLYPYNMYRSSFSIPIGFALFEE FPFNFRDDLTTGVRYRNLFDMMVDAVISAMAVMGHENLPVIVAETGWPSSGIDASEVDATLLYSEMFLKSLLTHLRSGFGTPLRKEGVSEVYIFELVEKD AKQGIRNWGLLHHNMTSKYSFEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 379 Download |
| MHLFSSYLLL LITLTAIAIP SITSATTIGV TYSTPGSISG TVQLSPDRIA AKVVSMKIPA 60 VRLLDSNPAM IRAFAYTNVS LFLSVPNPLV PLLASNRSLA MRWVYRHVLP FHPRTKISII 120 SVGNDVISYS PDVSPFLLRA MHNVHQSLVD LRIYKISVST TFSFFNIVPT AFPPSSAQFQ 180 QPNGEVIIRP ILQFLERTNS SFLINLYPYN MYRSSFSIPI GFALFEEFPF NFRDDLTTGV 240 RYRNLFDMMV DAVISAMAVM GHENLPVIVA ETGWPSSGID ASEVDATLLY SEMFLKSLLT 300 HLRSGFGTPL RKEGVSEVYI FELVEKDAKQ GIRNWGLLHH NMTSKYSFEF SDGGKARRFS 360 ELLIGFFMGV VMLYLLIM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 264 | 329 | 66 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-57 | 50 | 350 | 310 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71832.1 | 0 | 23 | 320 | 27 | 323 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191137.1 | 0 | 28 | 373 | 31 | 376 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276218.1 | 0 | 23 | 376 | 27 | 383 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316237.1 | 0 | 47 | 356 | 62 | 369 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530412.1 | 0 | 25 | 356 | 31 | 362 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 8e-39 | 28 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 9e-36 | 50 | 350 | 15 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 9e-36 | 50 | 350 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 9e-36 | 50 | 350 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_B | 2e-34 | 28 | 351 | 3 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
