| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10018816m |
| Family | CE10 |
| Protein Properties | Length: 324 Molecular Weight: 35637.4 Isoelectric Point: 5.0146 |
| Chromosome | Chromosome/Scaffold: 5 Start: 8066204 End: 8067175 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 14 | 320 | 0 |
| KIYKSGRIERLMGETTVPPSSEPQNGVVSKDVLYSPDNNLSVRIYLPEKAAENGEKLPLLVYFHGGGFIIETAFSPTYHSFLTAAVSASDCVAVSVDYRR APEHPISVPFDDSWTALKWVFTHIAGSGQEDWLDKHADFSKVVLSGDSAGANIVHHMAMRAGKEKLSPDLNDTGISGIILVHPYFWSKQPIDDKDTKDET LRMKVESFWKMANPDSKDGPDDPLLNVVQSESVDLSGLGCGKVLVMVAEKDALARQGWGYAAKLEKSCWKGEVEVLESEGEDHVFHLMKPTCDKAIEAMH KFSAFFK | |||
| Full Sequence |
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| Protein Sequence Length: 324 Download |
| MDSEIALDFS PVLKIYKSGR IERLMGETTV PPSSEPQNGV VSKDVLYSPD NNLSVRIYLP 60 EKAAENGEKL PLLVYFHGGG FIIETAFSPT YHSFLTAAVS ASDCVAVSVD YRRAPEHPIS 120 VPFDDSWTAL KWVFTHIAGS GQEDWLDKHA DFSKVVLSGD SAGANIVHHM AMRAGKEKLS 180 PDLNDTGISG IILVHPYFWS KQPIDDKDTK DETLRMKVES FWKMANPDSK DGPDDPLLNV 240 VQSESVDLSG LGCGKVLVMV AEKDALARQG WGYAAKLEKS CWKGEVEVLE SEGEDHVFHL 300 MKPTCDKAIE AMHKFSAFFK GDK* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00312 | Esterase_lipase | 3.0e-6 | 27 | 179 | 171 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
| COG2272 | PnbA | 2.0e-8 | 29 | 167 | 152 | + Carboxylesterase type B [Lipid metabolism] | ||
| pfam00135 | COesterase | 6.0e-9 | 27 | 172 | 159 | + Carboxylesterase family. | ||
| COG0657 | Aes | 3.0e-26 | 55 | 320 | 272 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 3.0e-54 | 73 | 300 | 231 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL57633.1 | 0 | 1 | 321 | 1 | 322 | AT3g48690/T8P19_200 [Arabidopsis thaliana] |
| DDBJ | BAE98942.1 | 0 | 1 | 321 | 1 | 322 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_178453.1 | 0 | 1 | 319 | 1 | 310 | hydrolase [Arabidopsis thaliana] |
| RefSeq | NP_190438.1 | 0 | 1 | 321 | 1 | 322 | CXE12; carboxylesterase [Arabidopsis thaliana] |
| RefSeq | NP_190439.1 | 0 | 1 | 323 | 1 | 329 | ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13); hydrolase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2zsi_A | 5e-33 | 19 | 322 | 46 | 351 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 2zsh_A | 5e-33 | 19 | 322 | 46 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 1e-32 | 19 | 322 | 38 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_E | 1e-32 | 19 | 322 | 38 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_D | 1e-32 | 19 | 322 | 38 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG492451 | 287 | 30 | 315 | 0 |
| BX840650 | 301 | 3 | 302 | 0 |
| EG492507 | 282 | 30 | 310 | 0 |
| EG423645 | 279 | 25 | 302 | 0 |
| FY433054 | 270 | 1 | 270 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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