y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10018875m |
Family | GH17 |
Protein Properties | Length: 349 Molecular Weight: 38165 Isoelectric Point: 7.4264 |
Chromosome | Chromosome/Scaffold: 5 Start: 7304462 End: 7305508 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 343 | 0 |
IGVNYGTVANNLPPPHQVVNFIKTKTNINHVKIFDANPDILAAFSGITGISLTVTIPNSDIVSLSKLPNARSWLSNHLLPFLPATSIRYIAVGNEIIATS DKTLIAHLLPTMESLTLALHLANVTGILVSTPHSLGILSGSSEPPSSGTFRRGYVKTIFAPILDFHNRTKSPFMVNPYPYFGFGPETLNYALFNSSDVVV FDPVTKMNYTNMFDAQLDAVYSAMKRVGYGDVDIVVAETGWPSAGEPNQTGVGLEYAEAYNRNLIKHVNSGKGTPLMPNRVFETCIFALFNENLKPSVSE QNFGLFKPDFTSVYDV |
Full Sequence |
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Protein Sequence Length: 349 Download |
MMRAHVLHLL LFQIVLTLIL PFSAAYHIGV NYGTVANNLP PPHQVVNFIK TKTNINHVKI 60 FDANPDILAA FSGITGISLT VTIPNSDIVS LSKLPNARSW LSNHLLPFLP ATSIRYIAVG 120 NEIIATSDKT LIAHLLPTME SLTLALHLAN VTGILVSTPH SLGILSGSSE PPSSGTFRRG 180 YVKTIFAPIL DFHNRTKSPF MVNPYPYFGF GPETLNYALF NSSDVVVFDP VTKMNYTNMF 240 DAQLDAVYSA MKRVGYGDVD IVVAETGWPS AGEPNQTGVG LEYAEAYNRN LIKHVNSGKG 300 TPLMPNRVFE TCIFALFNEN LKPSVSEQNF GLFKPDFTSV YDVGIMKN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 5.0e-90 | 28 | 343 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_190241.1 | 0 | 1 | 347 | 1 | 346 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283647.1 | 0 | 6 | 348 | 5 | 346 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002283660.1 | 0 | 6 | 348 | 5 | 305 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 23 | 348 | 22 | 344 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 23 | 348 | 20 | 342 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 343 | 1 | 313 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3f55_C | 0 | 27 | 343 | 1 | 313 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3f55_B | 0 | 27 | 343 | 1 | 313 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3f55_A | 0 | 27 | 343 | 1 | 313 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3em5_D | 0 | 27 | 343 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |