Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10018993m |
Family | GH3 |
Protein Properties | Length: 646 Molecular Weight: 70716.2 Isoelectric Point: 7.3499 |
Chromosome | Chromosome/Scaffold: 5 Start: 13448263 End: 13451201 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 118 | 346 | 0 |
STRLGIPALYSIDAVHGHSTFINATIFPHNIGLGATRDPQLVKRIGAITALEVKATGVAQAFAPCVAVCRDPRWGRCYESYSEDTKVVNMMTEGIIDGLQ GNAPYIADQKINVAGVAKHFVGDGGTVNGINEDNTVGDNATIFGIHMPPFEIAVKKGISSIMASYSSINGVKMHANRALITDYLKNTLKFQGFVISDWMG IDRITTPHRSNYTYSVEASINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 646 Download |
MYGVRSFFFS AVIVILFVSR YGGATAANRG YIKYKDPNAA VEERVEDLLA RMTLPEKLGQ 60 MCQVDRFNYT IREKYMKNGH EIFTKYLIGN YLSNPFDTGA DIGSRLQLVN DIQKLCLSTR 120 LGIPALYSID AVHGHSTFIN ATIFPHNIGL GATRDPQLVK RIGAITALEV KATGVAQAFA 180 PCVAVCRDPR WGRCYESYSE DTKVVNMMTE GIIDGLQGNA PYIADQKINV AGVAKHFVGD 240 GGTVNGINED NTVGDNATIF GIHMPPFEIA VKKGISSIMA SYSSINGVKM HANRALITDY 300 LKNTLKFQGF VISDWMGIDR ITTPHRSNYT YSVEASINAG IDMVMVPWEY PEYLEVLTKL 360 VNGGYIPMSR IDDAVRRVLR VKFSIGLFEN PFPAVENVAA EFGSEAHREV AREAVRKSMV 420 LLKNGKPNAD KVVPLQKKVK KIVVAGLHAK NMGWQCGGFT LTWQGFNGTG EVIPMNQRTG 480 SPTGKTRGTT ILEAIQRTVD PTTEVVYVEE ANQDTSKLHA DAAYTIVVVG ELPYAESNGD 540 SKTLGLYGPG PDTLKHTCGS GMKCMVVLVT GRPLVIEPYM DMIDALAVAW LPGTEGQGVA 600 DVLFGDHPFT GTLPRTWMRS VDQLPMNVGD KNYDPLFPFG FGIQT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 4.0e-33 | 104 | 635 | 590 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-41 | 419 | 643 | 241 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-82 | 45 | 643 | 653 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 2.0e-87 | 53 | 381 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 1.0e-91 | 52 | 501 | 457 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF79936.1 | 0 | 31 | 645 | 24 | 618 | exoglucanase precursor [Zea mays] |
RefSeq | NP_001051275.1 | 0 | 9 | 645 | 7 | 620 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 31 | 645 | 24 | 618 | exoglucanase1 [Zea mays] |
RefSeq | NP_191830.1 | 0 | 1 | 645 | 5 | 650 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002266470.1 | 0 | 31 | 645 | 25 | 622 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 31 | 645 | 2 | 599 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1iex_A | 0 | 31 | 645 | 2 | 599 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1iew_A | 0 | 31 | 645 | 2 | 599 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1iev_A | 0 | 31 | 645 | 2 | 599 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1ieq_A | 0 | 31 | 645 | 2 | 599 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |