y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10019114m |
Family | GT90 |
Protein Properties | Length: 448 Molecular Weight: 52680 Isoelectric Point: 6.1326 |
Chromosome | Chromosome/Scaffold: 5 Start: 12907594 End: 12909577 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 112 | 360 | 0 |
QVPDLELLFLCHDKPGVWKRDFRQEDNTTWPPPPLFHYCGHRDAYDIVFPDWSFWGWPEVNIKEWNKLSEAIKEGNKQIKWEDRVPYAYWKGNPMVSISR RNFMKCNFSDKYDPMVRLYVQDWKRESRAGFKGSNLEDQCTHRYKIYIEGNAWSVSEKYILACDSMTLLIKPEFYDFFVRSMIPMTHYWPIRPDHCGDLK FAVEWGNNNTDKAQGIGRQGSEYLMKNLEMKYVYDYMLYVLQGYGKLMK |
Full Sequence |
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Protein Sequence Length: 448 Download |
PKNIIKIPLN CTSLNSNTTQ TCPSNYPTKP DPDISSSETC PDYFRWIQQD LKVWEETGIT 60 RETLERAKPN AHFRLVIKAG RLYVHKYDRA YQTRDVFTIW GILQLLRMYP GQVPDLELLF 120 LCHDKPGVWK RDFRQEDNTT WPPPPLFHYC GHRDAYDIVF PDWSFWGWPE VNIKEWNKLS 180 EAIKEGNKQI KWEDRVPYAY WKGNPMVSIS RRNFMKCNFS DKYDPMVRLY VQDWKRESRA 240 GFKGSNLEDQ CTHRYKIYIE GNAWSVSEKY ILACDSMTLL IKPEFYDFFV RSMIPMTHYW 300 PIRPDHCGDL KFAVEWGNNN TDKAQGIGRQ GSEYLMKNLE MKYVYDYMLY VLQGYGKLMK 360 LDVTVPENAT EVCSETMACP ITDGGLIRQC MDDSLVMSPS VKAACDLPQP YSDDEMKSFL 420 EKQETAERET GKWTDEYWEV QNKIFQQ* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 2.0e-38 | 317 | 434 | 118 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 4.0e-98 | 35 | 212 | 178 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 1.0e-113 | 112 | 362 | 258 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF01419.1 | 0 | 1 | 447 | 76 | 523 | hypothetical protein [Arabidopsis thaliana] |
EMBL | CAB71058.1 | 0 | 108 | 442 | 1 | 336 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_182108.2 | 0 | 1 | 447 | 76 | 523 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_191687.2 | 0 | 1 | 415 | 92 | 507 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_191688.1 | 0 | 14 | 447 | 18 | 453 | unknown protein [Arabidopsis thaliana] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG453060 | 302 | 95 | 394 | 0 |
EG453069 | 301 | 95 | 393 | 0 |
EG453071 | 294 | 95 | 386 | 0 |
EX136930 | 284 | 20 | 303 | 0 |
EG453073 | 290 | 95 | 382 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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