Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10019163m |
Family | CBM43 |
Protein Properties | Length: 171 Molecular Weight: 18019.5 Isoelectric Point: 4.7335 |
Chromosome | Chromosome/Scaffold: 5 Start: 11802816 End: 11803786 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 33 | 116 | 1e-31 |
WCVAKNNAEDASLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEADEACNFNNNAALTSLNPSQGTCK |
Full Sequence |
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Protein Sequence Length: 171 Download |
MIMTLSLLAA TAAMLMMVAT AQIGGQVLQV ELWCVAKNNA EDASLQTAIE WACGQGGADC 60 GPIQQGGPCN DPTDVQKMAS FVFNNYYLKN GEADEACNFN NNAALTSLNP SQGTCKYPSS 120 KRGVNNGRVA DDTSMGADMS RGGRPVSSSW IVTFIGFCSL LTMTQIVHHL * 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-19 | 32 | 103 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-35 | 32 | 117 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67357.1 | 0 | 3 | 170 | 52 | 220 | unknown [Arabidopsis thaliana] |
EMBL | CAB68148.1 | 0 | 3 | 170 | 87 | 256 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 0 | 3 | 170 | 11 | 180 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 5.60519e-45 | 17 | 167 | 20 | 174 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525141.1 | 3.9937e-43 | 21 | 138 | 21 | 142 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-18 | 33 | 119 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |