Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10019247m |
Family | CE8 |
Protein Properties | Length: 528 Molecular Weight: 58717.4 Isoelectric Point: 9.99 |
Chromosome | Chromosome/Scaffold: 5 Start: 12732156 End: 12734169 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 214 | 512 | 0 |
FVVAQDGSATHRTINQALAAISGMGKSRSNRVIIYIKAGVYNEKIDIDRHMKNIMLVGDGMDRTIVTNNRNVPDGSTTYGSATFGVSGDGFWARDMTFEN TAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDCHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHANTGISIQHSR VRAAPEFEAVKGQFKNYLGRPWKKYSRTVFLKTDLDGLIDPRGWREWSGGYALSTLYYGEFMNTGTGAGTSRRVNWPGFHVLRDEGEASPFSVSRFIQG |
Full Sequence |
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Protein Sequence Length: 528 Download |
MYTFVKVTKL ITIMFFLAFA VLVTTSNTAE LDVLKMAQTA VVEARTSFGS IAVVEATSEV 60 ATSRYHNLVL SECEKLYGEG EARLSKLVVA HENFTVEDVR TWLSGVLANH HTCLDGLAQE 120 RQGHKPLVHS NVTLVLREAL AFYKKSRGHI KKRLHGPARP NHRPEGQKHG PRRPKHGPTR 180 PNHGPERQSH GPSRPNQSGG MLVSWNPTRS RADFVVAQDG SATHRTINQA LAAISGMGKS 240 RSNRVIIYIK AGVYNEKIDI DRHMKNIMLV GDGMDRTIVT NNRNVPDGST TYGSATFGVS 300 GDGFWARDMT FENTAGPHKH QAVALRVSSD LSLFYRCSFK GYQDTLFTHS LRQFYRDCHI 360 YGTIDFIFGD AAAVFQNCDI FVRRPMDHQG NMITAQGRDD PHANTGISIQ HSRVRAAPEF 420 EAVKGQFKNY LGRPWKKYSR TVFLKTDLDG LIDPRGWREW SGGYALSTLY YGEFMNTGTG 480 AGTSRRVNWP GFHVLRDEGE ASPFSVSRFI QGDSWIPITG VPFSAGV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 1.0e-150 | 10 | 527 | 537 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 7.0e-159 | 97 | 526 | 441 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-165 | 70 | 527 | 462 | + pectinesterase/pectinesterase inhibitor | ||
PLN02916 | PLN02916 | 0 | 8 | 527 | 522 | + pectinesterase family protein | ||
pfam01095 | Pectinesterase | 0 | 213 | 513 | 301 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB82677.1 | 0 | 1 | 527 | 1 | 496 | pectinesterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191632.2 | 0 | 1 | 527 | 1 | 519 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q84R10 | 0 | 1 | 527 | 1 | 519 | PME36_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 36; Includes: RecName: Full=Pectinesterase inhibitor 36; AltName: Full=Pectin methylesterase inhibitor 36; Includes: RecName: Full=Pectinesterase 36; Short=PE 36; AltName: Full=Pectin methylesterase 36; Short=AtPME36; Flags: Precursor |
RefSeq | XP_002274478.1 | 0 | 10 | 527 | 5 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511680.1 | 0 | 30 | 527 | 11 | 472 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 212 | 527 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 213 | 527 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 7e-24 | 223 | 462 | 17 | 284 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 7e-24 | 223 | 462 | 17 | 284 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 7e-24 | 223 | 462 | 17 | 284 | A Chain A, Pectin Methylesterase From Carrot |