| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10019781m |
| Family | GT20 |
| Protein Properties | Length: 864 Molecular Weight: 98039.4 Isoelectric Point: 6.1982 |
| Chromosome | Chromosome/Scaffold: 2 Start: 8869177 End: 8873344 |
| Description | UDP-Glycosyltransferase / trehalose-phosphatase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 44 | 560 | 0 |
| SKETDLSPKDRIIIVANELPIRAQRRVDGSSGSTSGGSTSTCCSKGWNFSWDKNSLLLQLKDGLGDEAIEVIYVGCLKEEIHPNEQEEVYQVLLESFKCV PTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF PSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGR KGRTMLLGVDDMDIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYDPIVLIDEPLKFYERVAYYVVA ECCLVTAVRDGMNLIPYEYIVSRQGNENLDKILKLEPNNHNHKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYVS THDVGYWARSFLQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 864 Download |
| MVSRSYSNLL ELASGDSPTF GRMNRQIPRI MAVAGIMSNI DNDSKETDLS PKDRIIIVAN 60 ELPIRAQRRV DGSSGSTSGG STSTCCSKGW NFSWDKNSLL LQLKDGLGDE AIEVIYVGCL 120 KEEIHPNEQE EVYQVLLESF KCVPTFLPLD LYTRYYHGFC KQQLWPLFHY MLPLSPDLGG 180 RFDRTLWQAY VSVNKIFADR IMEVINPEDD FVWVHDYHLM VLPTFLRKRF NRVKLGFFLH 240 SPFPSSEIYK TLPIREELLR ALLNSDLIGF HTFDYARHFL SCCSRMLGLT YESKRGYIGL 300 EYYGRTVSIK ILPVGIHMGQ LQSVLSLPET ERKVGELIER YGRKGRTMLL GVDDMDIFKG 360 ITLKLLAMEQ LLMQHPEWQG KVVLVQIANP ARGKGKDVKE MQAETYSTVK RINETFGRPG 420 YDPIVLIDEP LKFYERVAYY VVAECCLVTA VRDGMNLIPY EYIVSRQGNE NLDKILKLEP 480 NNHNHKKSML VVSEFIGCSP SLSGAIRVNP WNVDAVADAM DSALEVAEPE KQLRHEKHYK 540 YVSTHDVGYW ARSFLQDLER SCGEHGRRRC WGIGFGLSFR VVALDQSFRK LSMEHIVSAY 600 KRTKTRAILL DYDDTLMPQG SIDKRPSSKS IDILNTLCRD KDNLVFIVSA KSRDTLSDWF 660 SPCEKLGIAA EHGYFLRLKK AVEWENCVGA ADCSWKQIAE PVMELYTETT DGSTIEDKET 720 ALVWSYEDAD PDFGSCQAKE LLDHLESVLA NEPVTVKRGQ NYVEVKPQGV SKGLIARRML 780 SMMQERGTPF EFVLCIGDDR SDEDMFEVIC SSTEGPSIAP RAEVFACTVG QKPSKAKYYL 840 DDTTEIVRLM HGLASVTDQI TPV* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 2.0e-168 | 52 | 861 | 847 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 863 | 870 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 54 | 560 | 510 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 54 | 856 | 812 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 54 | 559 | 506 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52003.1 | 0 | 1 | 863 | 1 | 847 | AC012563_13 putative trehalose-6-phosphate synthase; 46897-44149 [Arabidopsis thaliana] |
| RefSeq | NP_974105.1 | 0 | 1 | 863 | 1 | 860 | ATTPS6; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002284972.1 | 0 | 1 | 863 | 1 | 854 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312472.1 | 0 | 1 | 859 | 1 | 847 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314777.1 | 0 | 1 | 860 | 1 | 837 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 155 | 560 | 75 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 155 | 560 | 75 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 155 | 560 | 75 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 155 | 560 | 75 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1uqu_B | 0 | 155 | 560 | 76 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 773 | 90 | 861 | 0 |
| HO779327 | 517 | 113 | 629 | 0 |
| HO779327 | 232 | 623 | 854 | 0 |
| HO795560 | 430 | 432 | 860 | 0 |
| HO777775 | 76 | 1 | 69 | 0.0000000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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