| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10019802m |
| Family | GT20 |
| Protein Properties | Length: 829 Molecular Weight: 94229.3 Isoelectric Point: 5.8067 |
| Chromosome | Chromosome/Scaffold: 2 Start: 9932968 End: 9937050 |
| Description | trehalose-6-phosphatase synthase S8 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 29 | 514 | 0 |
| SRERKIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIKSSEQEEVSQKLLEEFNCVATFLSKELQEMFYLGFCKHQLWP LFHYMLPMFPDHGDRFDRRLWQAYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDILRGLLNCD LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLDSTAAKTKEIQEQYKGKKLVLGIDDMDIFKGISLKLIAM EHLFETYWHLRGKVVLVQIVNPARSSGKDVEEAKRETYETAKRINERYGTPDYKPIVLIDRLVPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQG TRNKVLDDSSPRTSTLVVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSENEKQLRHEKHYHYISTHDVGYWAKSFMQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 829 Download |
| MTVPGIISDL DGDKAGDEYS EVTSSSGGSR ERKIIVANML PLQSKRDAET GKWCFNWDED 60 SLQLQLRDGF SSETEFLYVG SLNVDIKSSE QEEVSQKLLE EFNCVATFLS KELQEMFYLG 120 FCKHQLWPLF HYMLPMFPDH GDRFDRRLWQ AYVSANKIFS DRVMEVINPE DDYVWIQDYH 180 LMVLPTFLRK RFNRIKLGFF LHSPFPSSEI YRTLPVRDDI LRGLLNCDLI GFHTFDYARH 240 FLSCCSRMLG LDYESKRGHI GLDYFGRTVY IKILPVGVHM GRLESVLNLD STAAKTKEIQ 300 EQYKGKKLVL GIDDMDIFKG ISLKLIAMEH LFETYWHLRG KVVLVQIVNP ARSSGKDVEE 360 AKRETYETAK RINERYGTPD YKPIVLIDRL VPRSEKTAYY AAADCCLVNA VRDGMNLVPY 420 KYIVCRQGTR NKVLDDSSPR TSTLVVSEFI GCSPSLSGAI RVNPWDVDAV AEAVNSALKM 480 SENEKQLRHE KHYHYISTHD VGYWAKSFMQ DLERACRDHY SKRCWGIGFG LGFRVLSLSP 540 SFRKLSVEHI VPIYRNKERR AIFLDYDGTL VPESSIAQDP SAEVVSVLKA LCEDPKNTVF 600 IVSGRGKESL SNWLSPCDNL GIAAEHGYFI RWNSKDEWET CYSSTETEWR SMVEPVMRSY 660 MEATDGTSIE FKESALVWHH QDADPDFGSC QAKELLDHLE SVLANEPVVV KRGQHIVEVK 720 PQGVSKGLAA EKVIREMVES GNPPGLVMCI GDDRSDEDMF ESILSTVTNP ELLTQPEVYA 780 CTVGRKPSKA KYFLDDEADV LKLLRGLGDS SSSLKPTCHT QVAFESIV* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 3.0e-161 | 28 | 800 | 815 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 800 | 808 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 31 | 514 | 488 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 32 | 800 | 773 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 34 | 513 | 480 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC18810.1 | 0 | 1 | 828 | 1 | 826 | Strong similarity to trehalose-6-phosphate synthase homolog from A. thaliana chromosome 4 contig gb |
| GenBank | AAV65495.1 | 0 | 1 | 826 | 31 | 859 | trehalose 6-phosphate synthase [Gossypium hirsutum] |
| RefSeq | NP_173799.1 | 0 | 1 | 828 | 31 | 867 | ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | NP_177186.2 | 0 | 1 | 828 | 31 | 856 | ATTPS8; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002521023.1 | 0 | 1 | 828 | 31 | 861 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 106 | 514 | 63 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 106 | 514 | 63 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 106 | 514 | 63 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 106 | 514 | 63 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1uqu_B | 0 | 106 | 514 | 64 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 768 | 46 | 800 | 0 |
| HO779327 | 515 | 71 | 581 | 0 |
| HO779327 | 221 | 580 | 800 | 0 |
| HO797286 | 458 | 349 | 800 | 0 |
| HO795511 | 457 | 346 | 800 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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