| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10019922m |
| Family | GT31 |
| Protein Properties | Length: 659 Molecular Weight: 75801 Isoelectric Point: 8.5035 |
| Chromosome | Chromosome/Scaffold: 2 Start: 11683522 End: 11689977 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 424 | 605 | 0 |
| ERMAVRRSWMQHVLITSAKVVARFFVALHGRKEVNVELKKEAEYFGDIVLVPYMDSYDLVVLKTVAICEHGALAFSAKYIMKCDDDTFVKLGAVINEVKK VPEGRSLYIGNMNYYHKPLRGGKWAVTYEEWPEEDYPPYANGPGYVLSSDIARFIVEEFERHKLRLFKMEDVSVGMWVEHFK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 659 Download |
| MKKPKLAKVE KIDKLDLFSS LWKQRSVRVI MAIGFLYLLF VSVEIPLVFK SWSSSSISID 60 SLSRLEKLET EQVPQVETIP DPPLKPVSHP NSVREHHRGL LSSLRFDSET FDPSSKDGSV 120 ELHKSAKEAW QLGRKLWKEL ESGRLEKLVE KPEKNKSDSC PHSVSLTGSE FMNRENKLME 180 LPCGLTLGSH ITLVGRPRKS HPKDGDWSKL VSQFLIELQG LKTVEGEDPP RILHFNPRLK 240 GDWSKKPVIE QNSCYRMQWG PAQRCEGWKS RAEEETVDSH VKCEKWIRDD DNYSEGSRAR 300 WWLNRLIGRR KRVKVEWPFP FVEEKLFVLT LSAGLEGYHI NVDGKHVTSF PYRTGFTLED 360 ATGLTVNGDI DVHSVFVASL PTSHPSFAPQ RHLELSKRWQ APVVPDGPVE LFIGILSAGN 420 HFSERMAVRR SWMQHVLITS AKVVARFFVA LHGRKEVNVE LKKEAEYFGD IVLVPYMDSY 480 DLVVLKTVAI CEHGALAFSA KYIMKCDDDT FVKLGAVINE VKKVPEGRSL YIGNMNYYHK 540 PLRGGKWAVT YEEWPEEDYP PYANGPGYVL SSDIARFIVE EFERHKLRLF KMEDVSVGMW 600 VEHFKNTTNP VDYRHSLRFC QFGCVENYYT AHYQSPRQMI CLWDKLLRQN KPECCNMR* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01762 | Galactosyl_T | 6.0e-17 | 425 | 602 | 189 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| smart00908 | Gal-bind_lectin | 3.0e-19 | 182 | 375 | 194 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-23 | 181 | 376 | 196 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-27 | 178 | 375 | 198 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 1.0e-121 | 120 | 658 | 555 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55296.1 | 0 | 31 | 658 | 1 | 642 | AC008263_27 ESTs gb |
| DDBJ | BAA97209.1 | 0 | 1 | 658 | 1 | 681 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_177618.2 | 0 | 1 | 658 | 1 | 672 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | NP_201068.1 | 0 | 1 | 658 | 1 | 681 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002511491.1 | 0 | 1 | 658 | 1 | 670 | galactosyltransferase, putative [Ricinus communis] |
