Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10020107m |
Family | AA1 |
Protein Properties | Length: 542 Molecular Weight: 60091.9 Isoelectric Point: 8.9401 |
Chromosome | Chromosome/Scaffold: 2 Start: 12230053 End: 12233319 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 47 | 496 | 0 |
QGILINGQFPGPDIHSVTNDNIIINVYNSLDEPFLLSWNGVQQRRNSFVDGVYGTTCPIPPGKNYTYMLQMKDQIGSFYYFPSLGFHKAAGGFGGIRILS RPRIPVPFPDPAGDTTVLIGDWYKSNHTDLRAQLDNGKKLPLPDGILINGRSSGATLNVEQGKTYRLRISNVGLQDSLNFRIQDHKMKVVEVEGTHTLQT TFSSLDVHVGQSYSVLVTADQPPKDYYVVVSSRFTSNVLTTTGVLRYSNSAGAVSGPIPGGPTIQIDWSLNQARAIRTNLTASGPRPNPQGSYHYGMINT TRTIRLASSAGQVDGKQRYAVNSVSFKPADTPLKLADYFKIDGVYRTGSIQYQPTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGM DGGQWSPASRNEYNLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MAANASFAAA LLIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGQFPGPDI 60 HSVTNDNIII NVYNSLDEPF LLSWNGVQQR RNSFVDGVYG TTCPIPPGKN YTYMLQMKDQ 120 IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK SNHTDLRAQL 180 DNGKKLPLPD GILINGRSSG ATLNVEQGKT YRLRISNVGL QDSLNFRIQD HKMKVVEVEG 240 THTLQTTFSS LDVHVGQSYS VLVTADQPPK DYYVVVSSRF TSNVLTTTGV LRYSNSAGAV 300 SGPIPGGPTI QIDWSLNQAR AIRTNLTASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD 360 GKQRYAVNSV SFKPADTPLK LADYFKIDGV YRTGSIQYQP TGGGIYLDTS VMQVDYRTFV 420 EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPASRNEYN LRDAVARCTV QVYPSSWTAI 480 LIALDNVGMW NLRSEFWARQ YLGQQLYLRV YTPSTSLRDE YPVPRNALLC GRASGRRTRP 540 L* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02991 | PLN02991 | 0 | 11 | 541 | 533 | + oxidoreductase |
PLN02792 | PLN02792 | 0 | 11 | 538 | 532 | + oxidoreductase |
PLN02835 | PLN02835 | 0 | 15 | 538 | 524 | + oxidoreductase |
PLN02354 | PLN02354 | 0 | 11 | 535 | 534 | + copper ion binding / oxidoreductase |
PLN02168 | PLN02168 | 0 | 12 | 534 | 535 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL09733.1 | 0 | 1 | 541 | 1 | 541 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
GenBank | AAL24296.1 | 0 | 1 | 541 | 2 | 542 | Unknown protein [Arabidopsis thaliana] |
GenBank | AAM97070.1 | 0 | 1 | 541 | 1 | 541 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_177743.1 | 0 | 1 | 541 | 1 | 541 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002510630.1 | 0 | 1 | 541 | 5 | 546 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 531 | 4 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asq_A | 0 | 28 | 531 | 4 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asp_B | 0 | 28 | 531 | 4 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asp_A | 0 | 28 | 531 | 4 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1aso_B | 0 | 28 | 531 | 4 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |