| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10020113m |
| Family | GT77 |
| Protein Properties | Length: 538 Molecular Weight: 61691.9 Isoelectric Point: 9.2327 |
| Chromosome | Chromosome/Scaffold: 2 Start: 10098604 End: 10101458 |
| Description | Nucleotide-diphospho-sugar transferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT77 | 300 | 520 | 0 |
| VPNFLVCALDDETYQFSILQGLPVFFDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVILSDVDIYWFRNPLPLLQSFGPSVLAAQSDEYN TTVPINRPRRLNSGFYFARSDGPTISAMEKVVKHAATSGLSEQPSFYDTLCGEGGSYRVGDDRCLEPETNVTVQFLDRELFPNGAYGDLWLKEDVRAECE KKHCFVLHNNWISGRLKKLER | |||
| Full Sequence |
|---|
| Protein Sequence Length: 538 Download |
| MLARSEAYKS DIAVLMDPEI VLLPDFVSAL NHAHKLDRDW LLVSSSVDVP RFPFHWDETG 60 HFWRQDNGKR VRFGELQKII SSLQSWQSNS SEGKMIMAWN NVDEPLHCGV LPPFLYQRGT 120 HNQWIISEAV SCKRRFVFDA TSTISSFFLG NAKNRSDKYN VSEPKTRNWE YIGNSHLGQL 180 YGSLFSKSYT LPKLLKCNKR YMFVSALDRS VDLSMLEGKS VGFRTREKIS ACISRTKSRS 240 LKIDFVQKDK AVPLLKFPFD LQSLLPLVAD KNRTVVLSIA GYSYKDMLMS WVCRLRRLKV 300 PNFLVCALDD ETYQFSILQG LPVFFDPYAP KNISFNDCHF GSKCFQRVTK VKSRTVLKIL 360 KLGYNVILSD VDIYWFRNPL PLLQSFGPSV LAAQSDEYNT TVPINRPRRL NSGFYFARSD 420 GPTISAMEKV VKHAATSGLS EQPSFYDTLC GEGGSYRVGD DRCLEPETNV TVQFLDRELF 480 PNGAYGDLWL KEDVRAECEK KHCFVLHNNW ISGRLKKLER QMMRGLWEYD ASMRMCV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 8.0e-52 | 298 | 521 | 225 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52325.1 | 0 | 1 | 537 | 1 | 535 | AC011663_4 hypothetical protein; 72471-70598 [Arabidopsis thaliana] |
| EMBL | CAN65937.1 | 0 | 1 | 537 | 1 | 534 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_177220.2 | 0 | 1 | 537 | 1 | 537 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002271910.1 | 0 | 1 | 537 | 1 | 551 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312675.1 | 0 | 1 | 537 | 1 | 550 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX136452 | 306 | 185 | 489 | 0 |
| EX136364 | 305 | 132 | 435 | 0 |
| EL342448 | 250 | 288 | 537 | 0 |
| FD583738 | 196 | 343 | 538 | 0 |
| DK548123 | 189 | 350 | 538 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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