| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10020190m |
| Family | GH9 |
| Protein Properties | Length: 493 Molecular Weight: 54629.3 Isoelectric Point: 9.6822 |
| Chromosome | Chromosome/Scaffold: 2 Start: 10127359 End: 10131246 |
| Description | glycosyl hydrolase 9B1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 28 | 482 | 0 |
| DYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLSGGYYDAGDNVKFGFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLK ATAIPGVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETAAALAAASIVFRKRDPAYSRRLLDRATRVFAFANRYRGAYSNSLYHAVCP FYCDFNGYQDELLWGAAWLHKASRKRAYREFIVKNEVILKAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFESFKQNADGFICSILPGISHPQVQYSR GGLLVKTGGSNMQHVTSLSFLLLAYSNYLSHAKKVVPCGELTASPSLLRQIAKRQVDYILGDNPMGLSYMVGYGQKFPRRIHHRGSSVPSVSAHPSHIGC KEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MARKSLIFPV ILLAVLLFSP PIHSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS 60 ALRDGSSAGV DLSGGYYDAG DNVKFGFPMA FTTTMLSWSI IDFGKTMGPE LRNAVKAVKW 120 GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA 180 LAAASIVFRK RDPAYSRRLL DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL 240 WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF 300 ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK 360 KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY GQKFPRRIHH RGSSVPSVSA 420 HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG 480 LLGYFSTHSS WR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02308 | PLN02308 | 0 | 1 | 492 | 492 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 8 | 490 | 493 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 7 | 490 | 487 | + cellulase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 483 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 1 | 482 | 490 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA67156.1 | 0 | 27 | 492 | 27 | 493 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| EMBL | CAA67157.1 | 0 | 1 | 492 | 1 | 492 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_173735.1 | 0 | 1 | 488 | 1 | 488 | AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177228.1 | 0 | 27 | 492 | 27 | 492 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002527779.1 | 0 | 11 | 489 | 14 | 492 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 27 | 482 | 3 | 425 | A Chain A, Ofloxacin-Like Antibiotics Inhibit Pneumococcal Cell Wall Degrading Virulence Factors |
| PDB | 1ksc_A | 0 | 27 | 482 | 3 | 425 | A Chain A, Ofloxacin-Like Antibiotics Inhibit Pneumococcal Cell Wall Degrading Virulence Factors |
| PDB | 1ks8_A | 0 | 27 | 482 | 3 | 425 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 28 | 476 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 28 | 476 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
