CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10020237m
FamilyGT4
Protein PropertiesLength: 469 Molecular Weight: 52222.2 Isoelectric Point: 10.1521
ChromosomeChromosome/Scaffold: 2 Start: 11926675 End: 11928870
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42664315.4e-23
  EDLLFGIINSVSRGKGQDLFLRAFHESLETIKEKKLQVPTMHAVVVGSDMSRQTKFETELRNFVQEKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARG
  ECFGRITIEAMAFKLPVLGTAAGGTMEIVVNGTTGLLHNAGKEGVTPLAKNIVKLAMQVELRLTMG
Full Sequence
Protein Sequence     Length: 469     Download
MSKASTSIWV TMQRKRWAMM VLLFLSVSTV GLILVRSSFE SCNFSGQFVE EKNGDSSATK    60
LQSNPLGFMK SKLVLLVSHE LSLSGGPLLL MELAFLLRGV GAEVVWITNQ KPLEADQVIY    120
SLEHKMLDRG VQVISAKGQK AIDTALKADL IVLNTAVAGK WLDAVLKENV VKVLPKILWW    180
IHEMRGHYFN PDLVKHLPFV AGAMIDSHAT AEYWKNRTQA RLGIKMPKTY VVHLGNSKEL    240
MEVAEDSVAK RVLREHVRES LGVRNEDLLF GIINSVSRGK GQDLFLRAFH ESLETIKEKK    300
LQVPTMHAVV VGSDMSRQTK FETELRNFVQ EKKLENFVHF VNKTLTVAPY IAAIDVLVQN    360
SQARGECFGR ITIEAMAFKL PVLGTAAGGT MEIVVNGTTG LLHNAGKEGV TPLAKNIVKL    420
AMQVELRLTM GKNGYERVKE MFLEHHMSHR IASVLKEVLQ HAKAHALR* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03819GT1_WavL_like6.0e-18249447200+
COG0438RfaG2.0e-1888460388+
cd03798GT1_wlbH_like4.0e-20258458205+
cd03808GT1_cap1E_like1.0e-21221447228+
cd03801GT1_YqgM_like1.0e-3085456388+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAG12556.1014661451AC007797_16 Unknown Protein [Arabidopsis thaliana]
GenBankAAG13070.108446818402AC023754_8 Hypothetical protein [Arabidopsis thaliana]
EMBLCBI19755.1014671462unnamed protein product [Vitis vinifera]
RefSeqNP_173401.1014661472glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqNP_177675.1014681463glycosyl transferase family 1 protein [Arabidopsis thaliana]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3mbo_H0.000000002328463279410A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_G0.000000002328463279410A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_F0.000000002328463279410A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_E0.000000002328463279410A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
PDB3mbo_D0.000000002328463279410A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
Transmembrane Domains
StartEnd
1739
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY2903883381034400
HO7808963281364630
HO8056393251394630
ES8320743191224400
FC8885562841033860
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00577.1Aquca_001_00590.2Aquca_001_00590.1
Arabidopsis lyrata889408316473897892474368
Arabidopsis thalianaAT1G19710.1AT1G75420.1AT3G15940.2AT3G15940.1AT1G52420.1
Brachypodium distachyonBradi2g09620.1
Brassica rapaBra025759Bra027200Bra030384
Carica papayaevm.model.supercontig_99.5evm.model.supercontig_253.2
Capsella rubellaCarubv10011399mCarubv10013095m
Citrus clementinaCiclev10025538mCiclev10001031mCiclev10024994m
Citrus sinensisorange1.1g023290morange1.1g017123morange1.1g017085morange1.1g012132morange1.1g011954m
orange1.1g004942morange1.1g004760m
Cucumis sativusCucsa.105340.1Cucsa.300870.1
Eucalyptus grandisEucgr.F01601.1Eucgr.F03009.1Eucgr.J03011.1
Fragaria vescamrna15198.1-v1.0-hybridmrna14930.1-v1.0-hybridmrna05979.1-v1.0-hybrid
Glycine maxGlyma04g03170.1Glyma06g03220.1Glyma15g01640.6Glyma15g01640.5Glyma15g01640.4
Glyma15g01640.3Glyma08g22160.2Glyma07g03870.1Glyma13g43720.1
Gossypium raimondiiGorai.009G198800.1Gorai.003G012600.2Gorai.003G012600.1Gorai.007G199800.4Gorai.007G199800.3
Gorai.007G199800.1Gorai.009G132600.4Gorai.009G132600.3Gorai.009G132600.2Gorai.009G132600.1
Gorai.002G058400.1Gorai.011G077500.1
Linum usitatissimumLus10041786Lus10028338Lus10024281Lus10011469Lus10037523
Malus domesticaMDP0000210114MDP0000312093MDP0000064350MDP0000204168
Manihot esculentacassava4.1_006962mcassava4.1_006727mcassava4.1_002537m
Medicago truncatulaMedtr4g069840.1
Mimulus guttatusmgv1a005641mmgv1a002407m
Oryza sativaLOC_Os01g15780.1
Panicum virgatumPavirv00028369m
Physcomitrella patensPp1s24_249V6.3
Phaseolus vulgarisPhvul.009G060600.1Phvul.010G151400.1Phvul.005G172300.2Phvul.005G172300.1
Picea abiesMA_159042g1120
Populus trichocarpaPotri.005G118800.1Potri.002G031300.1Potri.001G179000.1Potri.001G179000.5
Prunus persicappa005334mppa005118mppa002059m
Ricinus communis30170.m01409429872.m00052635599.m00001450675.m000024
Setaria italicaSi002128m
Selaginella moellendorffii10326098243
Sorghum bicolorSb03g010200.1
Thellungiella halophilaThhalv10007567mThhalv10007509mThhalv10018489mThhalv10020188mThhalv10011288m
Thhalv10011286m
Vitis viniferaGSVIVT01009775001GSVIVT01018875001GSVIVT01017132001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)