Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10020897m |
Family | CBM43 |
Protein Properties | Length: 229 Molecular Weight: 22597 Isoelectric Point: 6.4475 |
Chromosome | Chromosome/Scaffold: 2 Start: 9458055 End: 9460015 |
Description | plasmodesmata callose-binding protein 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 99 | 6.4e-26 |
CVCKDGNEQVLQKAIDYACGNGADCSQIQPTGACYQPNTIKNHCDVAVNSYYQKKASTGATCDFNGAATQSPSATSSC |
Full Sequence |
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Protein Sequence Length: 229 Download |
MSVLLPLCLI ISMFTYSHAA YCVCKDGNEQ VLQKAIDYAC GNGADCSQIQ PTGACYQPNT 60 IKNHCDVAVN SYYQKKASTG ATCDFNGAAT QSPSATSSCL SGSSSSGTPS TGTPTTGTPT 120 SGTPTSGTPT SGTPTSGTPT GGTPTSGTPT SGFPNTGTPS TGTSTGMPNS GTPTNGMPTS 180 SSSSVFPGTT LGPTGSGLGD PNAGEKLLVR ANTVFFFLIG VAMLIVNA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-18 | 21 | 90 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-28 | 21 | 90 | 71 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52501.1 | 0 | 1 | 210 | 1 | 205 | AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana] |
GenBank | AAM62861.1 | 0 | 1 | 226 | 1 | 221 | unknown [Arabidopsis thaliana] |
DDBJ | BAD43464.1 | 0 | 1 | 197 | 1 | 191 | predicted GPI-anchored protein [Arabidopsis thaliana] |
RefSeq | NP_173968.1 | 0 | 1 | 210 | 1 | 180 | beta-1,3-glucanase-related [Arabidopsis thaliana] |
RefSeq | NP_564957.1 | 0 | 1 | 226 | 1 | 221 | PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4); callose binding / polysaccharide binding [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.0000000000005 | 20 | 90 | 12 | 83 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |