Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10021473m |
Family | GH17 |
Protein Properties | Length: 331 Molecular Weight: 35630.6 Isoelectric Point: 4.0444 |
Chromosome | Chromosome/Scaffold: 2 Start: 12912403 End: 12913613 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 327 | 0 |
GVCYGRNGDNIPTPEATVALYKTNSIDAIRMYEPFADMLEALRGSGLSVAFGPRNQEIPALAQDPAAATNFVTTWITPYINDVSIKWITIGNEVFPGDLA PFVAAAIRNVNAALTNSGVTGISVTTVLAMNALTNSYPPSAAMFLPDLTEFMTDVSSILSQTNSPLMVNVYPYFAYASQTPIVIDGDFQYSNMFDAMVDG FNSALEKINAGNVVVMVGETGWPTDGYQPYTSVDNAKAYNMGIRTCGGSSRKPTPRRPYTPVDVFLFEMFKEDLKDGPVEQSFGIFAPDMTPVYDV |
Full Sequence |
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Protein Sequence Length: 331 Download |
MDSKPTVLAI AIFFLLSIQI LCPAGVAGEI TGVCYGRNGD NIPTPEATVA LYKTNSIDAI 60 RMYEPFADML EALRGSGLSV AFGPRNQEIP ALAQDPAAAT NFVTTWITPY INDVSIKWIT 120 IGNEVFPGDL APFVAAAIRN VNAALTNSGV TGISVTTVLA MNALTNSYPP SAAMFLPDLT 180 EFMTDVSSIL SQTNSPLMVN VYPYFAYASQ TPIVIDGDFQ YSNMFDAMVD GFNSALEKIN 240 AGNVVVMVGE TGWPTDGYQP YTSVDNAKAY NMGIRTCGGS SRKPTPRRPY TPVDVFLFEM 300 FKEDLKDGPV EQSFGIFAPD MTPVYDVFCP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-12 | 107 | 320 | 229 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-85 | 32 | 329 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05912.1 | 0 | 11 | 325 | 8 | 314 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ABN05913.1 | 0 | 10 | 325 | 11 | 333 | Glycoside hydrolase, family 17 [Medicago truncatula] |
RefSeq | NP_177901.1 | 0 | 10 | 328 | 4 | 333 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_177902.1 | 0 | 1 | 329 | 1 | 343 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002306606.1 | 0 | 32 | 325 | 1 | 306 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 327 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 32 | 327 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 32 | 327 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 32 | 327 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 32 | 327 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |