Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10021484m |
Family | AA1 |
Protein Properties | Length: 546 Molecular Weight: 61690.2 Isoelectric Point: 5.7907 |
Chromosome | Chromosome/Scaffold: 2 Start: 12087802 End: 12090299 |
Description | SKU5 similar 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 42 | 500 | 0 |
GGNKQIIVINDMFPGPILNATANDIIIVNIFNNLNEPFLMTWNGLQLRKNSWQDGVRGTNCPIPPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAI RINTPELVPVPFPTPDYEYDILIGDWFYSDHTDMRASLDTGHSLPNPDGILFNGRGPEETFFAFEPGKMYRLRISNVGLKTCLNFRIQDHDMLLVETEGT YVQKRVYSSLDIHVGQSYSVLVTAKTDPVGISRSYYILATARFVDFYLGGIALIQYPNSPIDPVGSVPLAPASWDYSSSVEQALSIRMDLNVGAARSNPQ GSYHYGRINVTRTIILHNDVMLSSGRLRYTINGVSFVYPETPLKLADHFQLNDTIIPDMFPNYPSNKTPSLGTSVVDIHYKDFVHIVFQNPLFELESYHI DGYNFFVVGYGFGAWSESKRAGYNLVDAVSRSTIQVYPYSWAAILIAMDNQGMWNVRSQ |
Full Sequence |
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Protein Sequence Length: 546 Download |
MRHVLVEVLV LTFLFVLELS YAYAPIVLYQ WVVSYSQRSI LGGNKQIIVI NDMFPGPILN 60 ATANDIIIVN IFNNLNEPFL MTWNGLQLRK NSWQDGVRGT NCPIPPGTNW TYRFQVKDQI 120 GSYFYFPSLL LQKAAGGYGA IRINTPELVP VPFPTPDYEY DILIGDWFYS DHTDMRASLD 180 TGHSLPNPDG ILFNGRGPEE TFFAFEPGKM YRLRISNVGL KTCLNFRIQD HDMLLVETEG 240 TYVQKRVYSS LDIHVGQSYS VLVTAKTDPV GISRSYYILA TARFVDFYLG GIALIQYPNS 300 PIDPVGSVPL APASWDYSSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND 360 VMLSSGRLRY TINGVSFVYP ETPLKLADHF QLNDTIIPDM FPNYPSNKTP SLGTSVVDIH 420 YKDFVHIVFQ NPLFELESYH IDGYNFFVVG YGFGAWSESK RAGYNLVDAV SRSTIQVYPY 480 SWAAILIAMD NQGMWNVRSQ KAEQWYLGQE LYMRVKGEGQ EDPSNIPVRD ENPIPENVIR 540 CGRVL* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02792 | PLN02792 | 5.0e-172 | 27 | 543 | 521 | + oxidoreductase |
PLN02991 | PLN02991 | 9.0e-173 | 21 | 543 | 523 | + oxidoreductase |
PLN02168 | PLN02168 | 0 | 1 | 545 | 545 | + copper ion binding / pectinesterase |
PLN02354 | PLN02354 | 0 | 25 | 544 | 530 | + copper ion binding / oxidoreductase |
PLN02835 | PLN02835 | 0 | 25 | 545 | 521 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF26773.2 | 0 | 1 | 544 | 1 | 510 | AC007396_22 T4O12.2 [Arabidopsis thaliana] |
GenBank | AAF87105.1 | 0 | 1 | 544 | 1 | 497 | AC006434_1 F10A5.2 [Arabidopsis thaliana] |
GenBank | AAM67203.1 | 0 | 1 | 544 | 1 | 544 | pectinesterase, putative [Arabidopsis thaliana] |
GenBank | ABK28469.1 | 0 | 1 | 544 | 1 | 543 | unknown [Arabidopsis thaliana] |
RefSeq | NP_177707.1 | 0 | 1 | 544 | 1 | 544 | sks18 (SKU5 Similar 18); copper ion binding / pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 26 | 529 | 3 | 534 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asq_A | 0 | 26 | 529 | 3 | 534 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_B | 0 | 26 | 529 | 3 | 534 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_A | 0 | 26 | 529 | 3 | 534 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aso_B | 0 | 26 | 529 | 3 | 534 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |