| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10021691m |
| Family | GT77 |
| Protein Properties | Length: 390 Molecular Weight: 44833.7 Isoelectric Point: 9.748 |
| Chromosome | Chromosome/Scaffold: 2 Start: 3392943 End: 3394873 |
| Description | RhamnoGalacturonan specific Xylosyltransferase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT77 | 119 | 337 | 0 |
| EKVLVIAEDYATLYKVNEKWPGHAVLIPPALDPQSAHKFGSQGFYNLTSRRPQHLLNILELGYNVMYNDVDMVWLQDPFDYLQGSHDVYFMDDMIAIKPL NHSHDIPPLSRTGVTYVCSCMIFLRSTDGAKLLMKKWVEEIQAQPWNNTEAKKPHDQPAFNRALHKTKNQVDAYLLPQSAFPSGGLYFKNETWVNETMGK HVIVHNNYIIGYDKKMKRF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 390 Download |
| MAQLQQQQQQ RLISNRPISL LNRNGLLLLL FLTLFVILGV LLPLTKSPLF LFPNTTSSSS 60 ISPSSSSLPS ISDWRDYSLD QAAKFVAKNE TVIVCAVSYP FLPFLNNWLI SISRQKHQEK 120 VLVIAEDYAT LYKVNEKWPG HAVLIPPALD PQSAHKFGSQ GFYNLTSRRP QHLLNILELG 180 YNVMYNDVDM VWLQDPFDYL QGSHDVYFMD DMIAIKPLNH SHDIPPLSRT GVTYVCSCMI 240 FLRSTDGAKL LMKKWVEEIQ AQPWNNTEAK KPHDQPAFNR ALHKTKNQVD AYLLPQSAFP 300 SGGLYFKNET WVNETMGKHV IVHNNYIIGY DKKMKRFQDY HLWLVDDHAL ESPLGILKIY 360 QEPNTTEVKN QRKIVRKQRK NRGKKQRLP* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 6.0e-48 | 116 | 337 | 227 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB61018.1 | 0 | 69 | 358 | 144 | 444 | A_IG002N01.8 gene product [Arabidopsis thaliana] |
| EMBL | CAN69309.1 | 0 | 36 | 357 | 2 | 309 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_176048.1 | 0 | 7 | 389 | 3 | 383 | UDP-xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_849279.1 | 0 | 69 | 358 | 73 | 360 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002279469.1 | 0 | 67 | 357 | 73 | 361 | PREDICTED: hypothetical protein [Vitis vinifera] |
