Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10021707m |
Family | GH100 |
Protein Properties | Length: 536 Molecular Weight: 60743.9 Isoelectric Point: 7.312 |
Chromosome | Chromosome/Scaffold: 2 Start: 10655663 End: 10658049 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 68 | 522 | 0 |
NPMVTEAWEALCRSQVYFRGKPVGTIAAYDPASEDALNYDQVFVRDFVPSALAFLMKGESEIVKNFLLKTLHIQGQDKRIDRFKLGDGAMPASFKVLHNP IKETDTIIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLSLAERPECQKGMRLILSLCLSEGFDTFPTLLCADGCSMIDRRMGVYGYPIEIQALFFM ALRSALSMLKHDSEGKELMDKIVKRLHALSFHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPDWIFDFMPLRGGYFVGNVSPAHMDFRWFA LGNCIAVLSSLATPEQSNAIMDLIEARWEELVGEMPLKICYPAMESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIARRAIDLAEAR LLKDGWPEYYDGKSGRFIGKQARKFQTWSTAGYLVAKMMMDDPTHVGMISMEEEK |
Full Sequence |
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Protein Sequence Length: 536 Download |
MDRPKKRDVL RAVNSMSCLS ENGEKKGAER IRAVNSTSLS LYDSAHSLDG RSGWDTPVFS 60 MKDSLDPNPM VTEAWEALCR SQVYFRGKPV GTIAAYDPAS EDALNYDQVF VRDFVPSALA 120 FLMKGESEIV KNFLLKTLHI QGQDKRIDRF KLGDGAMPAS FKVLHNPIKE TDTIIADFGE 180 SAIGRVAPVD SGFWWIILLR AYTKSTGDLS LAERPECQKG MRLILSLCLS EGFDTFPTLL 240 CADGCSMIDR RMGVYGYPIE IQALFFMALR SALSMLKHDS EGKELMDKIV KRLHALSFHM 300 RSYFWLDFQQ LNDIYRYKTE EYSHTAVNKF NVIPDSIPDW IFDFMPLRGG YFVGNVSPAH 360 MDFRWFALGN CIAVLSSLAT PEQSNAIMDL IEARWEELVG EMPLKICYPA MESHEWRIVT 420 GCDPKNTRWS YHNGGSWPVL LWLLTAASIK TGRPQIARRA IDLAEARLLK DGWPEYYDGK 480 SGRFIGKQAR KFQTWSTAGY LVAKMMMDDP THVGMISMEE EKHMKPLLKR SSSWT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 2.0e-5 | 430 | 505 | 79 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 0 | 9 | 535 | 545 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 3 | 535 | 533 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 73 | 510 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 3 | 525 | 528 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65926.1 | 0 | 10 | 535 | 1 | 534 | putative invertase [Arabidopsis thaliana] |
GenBank | ABA08442.1 | 0 | 24 | 535 | 45 | 556 | neutral/alkaline invertase [Manihot esculenta] |
RefSeq | NP_177345.1 | 0 | 38 | 535 | 2 | 499 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
RefSeq | NP_564177.1 | 0 | 10 | 535 | 1 | 534 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002327253.1 | 0 | 1 | 535 | 1 | 556 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES848839 | 360 | 171 | 529 | 0 |
CK269009 | 329 | 207 | 535 | 0 |
ES809234 | 324 | 197 | 520 | 0 |
DT454311 | 312 | 209 | 519 | 0 |
ES810060 | 309 | 93 | 401 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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