y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10021944m |
Family | GH1 |
Protein Properties | Length: 545 Molecular Weight: 62489.9 Isoelectric Point: 5.5131 |
Chromosome | Chromosome/Scaffold: 2 Start: 12164950 End: 12167941 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 39 | 519 | 0 |
RANFPKGFIFGTATAAFQVEGAVDEGCRGPSMWDIYTKKYPHKCNYHNADVAVDFYHRYKEDIKLMKRLNTDGFRFSIAWPRIFPHGRMEKGISKAGVQY YHNLIDELLANDITPLVTVFHWDTPQDLEDEYGGFLSDRIIKDFTEYANFTFQEYGDKVKHWVTFNEPWVFSRAGYDIGKKAPGRCSKYIKEHGEMCQDG RSGYEAYIVSHNMLLAHADAVDAFRKCDKCKGGKIGIAHSPAWFEAHELSDEEHETTPVTGLIDFILGWHLHPTTYGDYPQSMKDHVGHRLPEFTEAQKE KLKNSADFVGINYYTSVFALHDEEPDPSQPSWQSDSLVDWEPRYVDKLNAYVAKPDVAKVEVYAKGLRSLLKYIKDKYGNPEIIITENGYGEDLGEQDTS LVVALSDEHRRYYIQSHLLSLHQAVCDDKVNVTGYFLWSLMDTFEWQEGYNARFGLYYVDYKNNLTRHEKLSAQWYSSFLH |
Full Sequence |
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Protein Sequence Length: 545 Download |
MGRFHKLPLL GLVLFLGLTG SLTAANEYAC SSTDIHFTRA NFPKGFIFGT ATAAFQVEGA 60 VDEGCRGPSM WDIYTKKYPH KCNYHNADVA VDFYHRYKED IKLMKRLNTD GFRFSIAWPR 120 IFPHGRMEKG ISKAGVQYYH NLIDELLAND ITPLVTVFHW DTPQDLEDEY GGFLSDRIIK 180 DFTEYANFTF QEYGDKVKHW VTFNEPWVFS RAGYDIGKKA PGRCSKYIKE HGEMCQDGRS 240 GYEAYIVSHN MLLAHADAVD AFRKCDKCKG GKIGIAHSPA WFEAHELSDE EHETTPVTGL 300 IDFILGWHLH PTTYGDYPQS MKDHVGHRLP EFTEAQKEKL KNSADFVGIN YYTSVFALHD 360 EEPDPSQPSW QSDSLVDWEP RYVDKLNAYV AKPDVAKVEV YAKGLRSLLK YIKDKYGNPE 420 IIITENGYGE DLGEQDTSLV VALSDEHRRY YIQSHLLSLH QAVCDDKVNV TGYFLWSLMD 480 TFEWQEGYNA RFGLYYVDYK NNLTRHEKLS AQWYSSFLHD GLKGFEDEHD GGLKGFEDDE 540 HDEL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 5.0e-112 | 30 | 518 | 490 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 8.0e-116 | 33 | 522 | 494 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-124 | 41 | 514 | 492 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 5.0e-132 | 43 | 514 | 483 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-156 | 38 | 517 | 487 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC39504.1 | 0 | 1 | 523 | 1 | 522 | ATA27 [Arabidopsis thaliana] |
GenBank | AAF26759.2 | 0 | 1 | 523 | 348 | 869 | AC007396_8 T4O12.15 [Arabidopsis thaliana] |
GenBank | AAL67131.1 | 0 | 35 | 523 | 1 | 488 | putative beta-glucosidase [Arabidopsis thaliana] |
RefSeq | NP_177722.1 | 0 | 1 | 523 | 1 | 522 | ATA27; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_188774.2 | 0 | 6 | 523 | 2 | 516 | BGLU19 (BETA GLUCOSIDASE 19); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 37 | 518 | 14 | 488 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_B | 0 | 23 | 518 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 23 | 518 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 23 | 518 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 23 | 518 | 14 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |