| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10022009m |
| Family | GH9 |
| Protein Properties | Length: 485 Molecular Weight: 53553.3 Isoelectric Point: 8.9446 |
| Chromosome | Chromosome/Scaffold: 2 Start: 10424716 End: 10426511 |
| Description | cellulase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 476 | 0 |
| NYREALSKSLLFFQGQRSGRLPRGQQLSWRASSGLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELQNARVNIRWATDYLLK CARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAAASMVFRKVDSKYSRLLLATAKNVMQFAIQYRGAYSDSLSSSVC PFYCSYSGYKDELMWGASWLLTATNNPYYANFIKSLGGGDQPDIFSWDNKYAGAYVLLSRRALLNKDSNFEQFKQAAENFMCQILPDSPSSSTQYTQGGL MYKLPQSNLQYVTSITFLLTTYAKYMKATKHTFNCGSSVIVPNALISLSKRQVDYILGENPIKMSYMVGFGSNFPKRIHHRASSLPSHSLHSRSLGCNGG FQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHSEPATYINAAFVGPLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MTSPFFFLFL FSFLLTGNVD ANPNYREALS KSLLFFQGQR SGRLPRGQQL SWRASSGLSD 60 GSSAHVDLTG GYYDAGDNVK FNFPMAFTTT MLSWSTLEYG KRMGPELQNA RVNIRWATDY 120 LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSPSNPGSDV AAETAAALAA 180 ASMVFRKVDS KYSRLLLATA KNVMQFAIQY RGAYSDSLSS SVCPFYCSYS GYKDELMWGA 240 SWLLTATNNP YYANFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQFKQAA 300 ENFMCQILPD SPSSSTQYTQ GGLMYKLPQS NLQYVTSITF LLTTYAKYMK ATKHTFNCGS 360 SVIVPNALIS LSKRQVDYIL GENPIKMSYM VGFGSNFPKR IHHRASSLPS HSLHSRSLGC 420 NGGFQSFYTQ NPNPNILTGA IVGGPNQNDG YPDQRDDYSH SEPATYINAA FVGPLAYFAS 480 GRPA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02175 | PLN02175 | 0 | 1 | 482 | 482 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 21 | 479 | 463 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 19 | 480 | 466 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 24 | 476 | 464 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 20 | 480 | 468 | + cellulase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63253.1 | 0 | 1 | 482 | 1 | 482 | putative beta-glucanase [Arabidopsis thaliana] |
| GenBank | AAT75042.1 | 0 | 17 | 480 | 19 | 483 | Cel9B [Populus tremula x Populus tremuloides] |
| RefSeq | NP_173701.1 | 0 | 1 | 482 | 1 | 482 | CEL5 (CELLULASE 5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_177294.1 | 0 | 1 | 482 | 1 | 482 | ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002329161.1 | 0 | 17 | 480 | 19 | 478 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 476 | 4 | 426 | A Chain A, Crystal Structure At 1.5a Resolution Of The Barley Alpha- Amylase Isozyme 1 |
| PDB | 1ksc_A | 0 | 24 | 476 | 4 | 426 | A Chain A, Crystal Structure At 1.5a Resolution Of The Barley Alpha- Amylase Isozyme 1 |
| PDB | 1ks8_A | 0 | 24 | 476 | 4 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
