CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10022022m
FamilyGT4
Protein PropertiesLength: 416 Molecular Weight: 46393.5 Isoelectric Point: 7.1756
ChromosomeChromosome/Scaffold: 2 Start: 13295184 End: 13297240
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42093827.10458e-43
  KLNFLSINRFERKKNIDLAVSAFAMLCKQKQNLSDVTLTVAGKCIIIPYHHQMHCGYDERLKENVEYLEELRSLAEKEGVSDRVNFITSCSTAERNELLS
  GCLCVLYTPTDEHFGIVPLEAMAAYKPVVACNSGGPVETVKNGVTGYLCEPTPEDFSSAMAKFIEDTELANRMG
Full Sequence
Protein Sequence     Length: 416     Download
MGKKEASKMN VAIIHPDLGI GGAERLIVDA AVELASHGHK VHVFTSHHDK SRCFEETLSG    60
VFQVTVYGSF LPRHIFYRLH AVCAYLRCLF VALCVLMGWS SFDVIIADQV SVVVPLLKLK    120
RSSKVVFYCH FPDLLLAKHT TALRRMYRKP IDFIEEQTTG MADMILVNSN FTALTFANTF    180
KRLNAQGSRP AVLYPAVNVD QFNEPNTYKL NFLSINRFER KKNIDLAVSA FAMLCKQKQN    240
LSDVTLTVAG KCIIIPYHHQ MHCGYDERLK ENVEYLEELR SLAEKEGVSD RVNFITSCST    300
AERNELLSGC LCVLYTPTDE HFGIVPLEAM AAYKPVVACN SGGPVETVKN GVTGYLCEPT    360
PEDFSSAMAK FIEDTELANR MGAEARNHVV ESFSVKTFGQ KLNQYLVDAV APKED*        420
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03811GT1_WabH_like1.0e-3710394402+
cd03798GT1_wlbH_like1.0e-3811402412+
COG0438RfaG1.0e-408413415+
cd03801GT1_YqgM_like2.0e-5110402408+
cd03805GT1_ALG2_like09402407+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAC83030.1014151405Similar to gene pi010 glycosyltransferase gi
GenBankAAM26674.1014151403At1g78800/F9K20_16 [Arabidopsis thaliana]
GenBankACU21459.1014151407unknown [Glycine max]
RefSeqNP_178001.2014151403glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002317454.1084154413predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2f9f_A0.0000000000000721237026158A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB3c48_B0.0000000003280411296427A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c48_A0.0000000003280411296427A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4v_B0.0000000003280411276407A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4v_A0.0000000003280411276407A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
Transmembrane Domains
StartEnd
85107
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EG522343306803850
EG52234228612860
CK27432532563240
EL44718732313230
EG522342332823140.000005
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_021_00182.1Aquca_021_00182.2Aquca_021_00182.3
Arabidopsis lyrata477043
Arabidopsis thalianaAT1G78800.1
Brachypodium distachyonBradi5g19840.1
Brassica rapaBra035064
Carica papayaevm.model.supercontig_77.17
Chlamydomonas reinhardtiig1920.t1
Citrus clementinaCiclev10022599mCiclev10020399m
Citrus sinensisorange1.1g036860m
Cucumis sativusCucsa.220170.2Cucsa.273740.2Cucsa.273740.1Cucsa.220170.1
Eucalyptus grandisEucgr.F01245.1
Fragaria vescamrna27271.1-v1.0-hybrid
Glycine maxGlyma12g35950.2Glyma12g35950.1Glyma13g34430.1Glyma13g34430.2
Gossypium raimondiiGorai.002G054000.2Gorai.002G054000.1
Linum usitatissimumLus10037008Lus10015797
Malus domesticaMDP0000319369MDP0000185482
Manihot esculentacassava4.1_008785m
Medicago truncatulaMedtr1g104880.1
Mimulus guttatusmgv1a007424m
Oryza sativaLOC_Os04g49960.1
Panicum virgatumPavirv00018845mPavirv00056995mPavirv00050038mPavirv00004378m
Physcomitrella patensPp1s246_77V6.1
Phaseolus vulgarisPhvul.005G081600.1
Picea abiesMA_499839g0010
Populus trichocarpaPotri.011G109000.1
Prunus persicappa006490mppa006502m
Ricinus communis29681.m001322
Setaria italicaSi017356mSi013830mSi010219m
Selaginella moellendorffii419620
Sorghum bicolorSb06g026860.1
Thellungiella halophilaThhalv10019736mThhalv10007837m
Vitis viniferaGSVIVT01014186001
Volvox carteriVocar20014584m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny