| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10022300m |
| Family | GT28 |
| Protein Properties | Length: 710 Molecular Weight: 77083.5 Isoelectric Point: 6.4487 |
| Chromosome | Chromosome/Scaffold: 2 Start: 11304736 End: 11309841 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT28 | 261 | 421 | 1.90577e-43 |
| VLLLGGSLGANAINIALLNCYSQLLSEHENWFFVWQTGVEAFDEMDSLVRSHPRLFLSPFLRSIGVAYAAADLVISRAGAMTCSEIMALGKPSILIPSPH SDEGDQVRNASLMADSVGSKLITEEELDSITLRAAMEDILGNEELMTEMSERAFKCAKPEA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 710 Download |
| MAIPSYIFPN IPIYPSTKLV PSRLTFSSSS SSSSSSSSFC CFSVDRQINH SSVSNELSGL 60 RVVISAGGTA GHISSALAIG DELKTADPLA QILFIGFPNS MESTTVPSAG FDFSAISTVG 120 SSSSRPFLCF TSFLNFPFRL IQSTFESYKL LREFKPQIVV GTGGHASFPV CFAAVILGTT 180 FVIQEQDSIP GTTNWILSFF ADTIFAPFNC AVTNLPKRVA AKCVVYGNPI RQALRRYSSK 240 GAARVSFFGQ WAGAVSDAKV VLLLGGSLGA NAINIALLNC YSQLLSEHEN WFFVWQTGVE 300 AFDEMDSLVR SHPRLFLSPF LRSIGVAYAA ADLVISRAGA MTCSEIMALG KPSILIPSPH 360 SDEGDQVRNA SLMADSVGSK LITEEELDSI TLRAAMEDIL GNEELMTEMS ERAFKCAKPE 420 AASDVAKHII SIINSKDRTT VNEICTADEL HYVTVPNSDW RLALWRYLPS PKAPKRKHPL 480 LLLSGIGTNA VTFDLSPECS FARFMSGSGF DTWILELRGA GLSSLSADTN LGSKIIGLQD 540 RISKRVGDFK QRLELIPHYN WDFDNYLEED VPSAMEYVRA QTKPKDGKLL AVGHSMGGIL 600 LYAMLSRCGF KGIDSGLASV ATLASTLDYS SSRTLLKYLL PIKEPAEAIN LPIMPIDTML 660 AMAHPLMFRP PYALSWLTAN ISAPQMMDPE VIEKLVLNSL SESAKHFCS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK12446 | PRK12446 | 3.0e-33 | 61 | 434 | 376 | + undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | ||
| COG0707 | MurG | 1.0e-77 | 61 | 435 | 375 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| TIGR01133 | murG | 4.0e-79 | 61 | 429 | 370 | + undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RM 8449890 RT The final step of peptidoglycan subunit assembly in Escherichia coli occurs in the cytoplasm. RA Bupp K, van Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3 [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| PRK00726 | murG | 1.0e-102 | 61 | 433 | 373 | + undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | ||
| cd03785 | GT1_MurG | 2.0e-120 | 61 | 428 | 369 | + MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030246 | carbohydrate binding |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52073.1 | 0 | 433 | 700 | 45 | 350 | AC012679_11 unknown protein; 64603-66831 [Arabidopsis thaliana] |
| EMBL | CBI15500.1 | 0 | 4 | 434 | 7 | 430 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_177515.1 | 0 | 1 | 438 | 1 | 431 | glycosyl transferase family 28 protein [Arabidopsis thaliana] |
| RefSeq | NP_565071.1 | 0 | 433 | 700 | 45 | 342 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002524882.1 | 0 | 15 | 435 | 20 | 432 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2u_A | 1.99993e-41 | 62 | 432 | 5 | 354 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| PDB | 1nlm_B | 4e-33 | 58 | 429 | 5 | 350 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| PDB | 1nlm_A | 4e-33 | 58 | 429 | 5 | 350 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| PDB | 1f0k_B | 4e-33 | 58 | 429 | 5 | 350 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| PDB | 1f0k_A | 4e-33 | 58 | 429 | 5 | 350 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DK523867 | 221 | 218 | 438 | 0 |
| EV215438 | 229 | 79 | 307 | 0 |
| ES821435 | 359 | 60 | 414 | 0 |
| ES903975 | 250 | 1 | 248 | 0 |
| DK523597 | 204 | 235 | 438 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |