| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10022317m |
| Family | GH35 |
| Protein Properties | Length: 822 Molecular Weight: 92625.4 Isoelectric Point: 9.5237 |
| Chromosome | Chromosome/Scaffold: 2 Start: 12739103 End: 12743460 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 34 | 338 | 0 |
| LIIDGKHKILFSGSIHYTRSTPQMWPSLIAKAKSGGLDVIDTYVFWNIHEPQQGHFDFSGRRDIVKFIKYVHAQGLYVCLRIGPFIQGEWSYGGLPFWLH NVKGIVFRTDNEPFKFHMKRYAQMIVKLMKSEKLYASQGGPIILSQIENEYGMVARAFRQEGKSYVKWAAEMAVELETGVPWVMCKQDDAPDPVINACNG RQCGETFKGPNSLNKPAIWTENWTSFYQTYGEEPLMRSAEDIAFQVALFIARNGSFVNYYMYHGGTNFGRNASQFVITSYYDQAPLDEYGLLRQPKWGHL KELHA | |||
| Full Sequence |
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| Protein Sequence Length: 822 Download |
| MTTTSQYSQA LFILITAVIV AGDAANVTYD GRSLIIDGKH KILFSGSIHY TRSTPQMWPS 60 LIAKAKSGGL DVIDTYVFWN IHEPQQGHFD FSGRRDIVKF IKYVHAQGLY VCLRIGPFIQ 120 GEWSYGGLPF WLHNVKGIVF RTDNEPFKFH MKRYAQMIVK LMKSEKLYAS QGGPIILSQI 180 ENEYGMVARA FRQEGKSYVK WAAEMAVELE TGVPWVMCKQ DDAPDPVINA CNGRQCGETF 240 KGPNSLNKPA IWTENWTSFY QTYGEEPLMR SAEDIAFQVA LFIARNGSFV NYYMYHGGTN 300 FGRNASQFVI TSYYDQAPLD EYGLLRQPKW GHLKELHAAV KLCEEPLLSG LQTTIPLGKL 360 LTAFVFGKKA NLCSALLVNQ DKCDSTVQFH NSSYILSPKS ISVLPDCKNV AFNTAKVNAQ 420 YNTRTREPRQ NLSSPHMWEE FTETIPSFSE TSVRSEFFLE HMNTTQDTSD YLWQTTRFHQ 480 PEEALSVLKV NHLGHVLHAF VNGRFIGSMH GTFKAHRFLL EKNVSLNNGT NNIALLSVMV 540 GLPNSGAHLE RRVVGTRGAK IWNGKHTLYF NNYSWGYQVG LQGEKFHAYT ENGAAKVQWK 600 QYRDSKSQPL TWYKASFDTP EGTDSVALNL GSMGKGEAWV NGQSIGRYWV SFHTYKGNPS 660 QIWYHIPRSF LKRNSSNLLV ILEEEREGNP LGITIDTVSV TNVCSHVSSS HPPPVISQRR 720 KGHNRNKRRH LNHQYDRRPK VQLQCPNGRK ISKVLFASFG TPNGNCWSYS VGSCHSPKSL 780 AVIHKACLNK SKCSVSVWSK TFGVDSCPHA VKSLLVHAQC S* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 6.0e-5 | 58 | 193 | 159 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 3.0e-21 | 743 | 820 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 1.0e-21 | 27 | 330 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-152 | 33 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 8 | 821 | 853 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG29193.1 | 0 | 17 | 821 | 2 | 780 | AC078898_3 beta-galactosidase, putative [Arabidopsis thaliana] |
| GenBank | AAG51670.1 | 0 | 3 | 638 | 2 | 636 | AC010704_14 putative beta-galactosidase, 3' partial; 3669-1 [Arabidopsis thaliana] |
| DDBJ | BAC43014.1 | 0 | 3 | 804 | 2 | 798 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_177866.2 | 0 | 3 | 821 | 2 | 815 | BGAL16 (beta-galactosidase 16); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002302225.1 | 0 | 20 | 821 | 1 | 798 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 5.99994e-41 | 33 | 356 | 14 | 344 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.00003 | 594 | 681 | 493 | 571 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 9e-33 | 27 | 347 | 11 | 342 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.006 | 612 | 733 | 528 | 653 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 9e-33 | 27 | 347 | 11 | 342 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
