| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10022320m |
| Family | GH35 |
| Protein Properties | Length: 692 Molecular Weight: 78026.3 Isoelectric Point: 6.3372 |
| Chromosome | Chromosome/Scaffold: 2 Start: 11028969 End: 11033628 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 65 | 389 | 0 |
| FWKDENPFQIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQVYVPWNLHEPKPGIMVFEGIGDLVSFLKLCDNLDFLVMLRAGPYICGEWDLGGFPAWLL AVKPRLQLRTSDPAYLKLVERWWDVLLPKVFPLLYSNGGPVIMVQIENEYGSYGHDKAYLRNLVSMAREHLGDDVIVYTTDGGTRETLEKGTVPVDDVYS AVDFTTGDDPWPIFELQKKFNAPGRSPPLSSEFYTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNGANTGSEEFDYKPDLTSY DYDAPIKESGDIDNPKFQALQRVIK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 692 Download |
| MVMTSRRSWP STRRHQLAFV LLLVLVALGI CVPVFALLPS LSSPQSLFRG DKMISRRFYI 60 KADVFWKDEN PFQIIGGDLH YFRVLPEYWE DRLLRAKALG LNTIQVYVPW NLHEPKPGIM 120 VFEGIGDLVS FLKLCDNLDF LVMLRAGPYI CGEWDLGGFP AWLLAVKPRL QLRTSDPAYL 180 KLVERWWDVL LPKVFPLLYS NGGPVIMVQI ENEYGSYGHD KAYLRNLVSM AREHLGDDVI 240 VYTTDGGTRE TLEKGTVPVD DVYSAVDFTT GDDPWPIFEL QKKFNAPGRS PPLSSEFYTG 300 WLTHWGEKIA KTDAEFTAAS LEKILSRNGS AVLYMVHGGT NFGFYNGANT GSEEFDYKPD 360 LTSYDYDAPI KESGDIDNPK FQALQRVIKK YNTAPHSITP SKQLKAYGPI KMQMTTSLFD 420 LVSMTDPADM ITSANPISME SSGQMFGFLL YESSYITKKS GNILRIPKVH DRAQVFVSCL 480 SQEANEGVLR YIGTTERWNN QPISLPTIEC TSNTSLFILV ENMGRVNYGS YIFDEKGILS 540 SVYLDGQILH GWKMIPIPFQ NLNQRPNLSF EMHHNRKRSE KSNLTNDVGQ KEPALFAGEF 600 SINSAEEIKD TYLSFNGWGK GVAFVNKFNI GRYWPSVGPQ CNLYVPAPLL KPGKNTLVIF 660 ELESPHLELL LEAVDQQDFT CGSNNSKVNQ L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-6 | 78 | 220 | 160 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-34 | 61 | 660 | 646 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 4.0e-45 | 74 | 401 | 339 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-160 | 65 | 391 | 327 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55646.1 | 0 | 42 | 653 | 47 | 587 | AC008017_19 Similar to acid beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CBI35958.1 | 0 | 52 | 688 | 69 | 707 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001031273.1 | 0 | 83 | 691 | 26 | 635 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_565051.1 | 0 | 42 | 691 | 47 | 697 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002280228.1 | 0 | 52 | 688 | 45 | 683 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 63 | 663 | 16 | 599 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thd_C | 0 | 63 | 663 | 16 | 599 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thd_B | 0 | 63 | 663 | 16 | 599 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thd_A | 0 | 63 | 663 | 16 | 599 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thc_D | 0 | 63 | 663 | 16 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
