y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10022420m |
Family | GH3 |
Protein Properties | Length: 768 Molecular Weight: 83722.5 Isoelectric Point: 7.6115 |
Chromosome | Chromosome/Scaffold: 2 Start: 13019548 End: 13022538 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 72 | 326 | 0 |
IPRLGVPAYEWWSEALHGIAYTGPGTWFNGTVKAATSFPQVILTAASFDSYEWFRIGQAIGEEARGMYNAGQANGMTFWAPNINIFRDPRWGRGQETPGE DPTMTGSYAVAYVRGLQGDSFDGRKVLSGAHLQASACCKHFTAYDLDRWKGVTRYVFNAQVSLADMAETYQPPFKKCVEEGRATCIMCAYTRVNGIPSCA DPNLLTHTVRGLWGFRGYIASDCDAVSLIYEAQGYAKSHEDAVGDVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 768 Download |
MSQLVILLPL LFIFQVVDSA PPPHACDPSN PATKLYQFCR TDLQISNRAH DLVSRLTVDE 60 KISQLVNTAP GIPRLGVPAY EWWSEALHGI AYTGPGTWFN GTVKAATSFP QVILTAASFD 120 SYEWFRIGQA IGEEARGMYN AGQANGMTFW APNINIFRDP RWGRGQETPG EDPTMTGSYA 180 VAYVRGLQGD SFDGRKVLSG AHLQASACCK HFTAYDLDRW KGVTRYVFNA QVSLADMAET 240 YQPPFKKCVE EGRATCIMCA YTRVNGIPSC ADPNLLTHTV RGLWGFRGYI ASDCDAVSLI 300 YEAQGYAKSH EDAVGDVLKA GMDVNCGSYL QKHTKSALQQ KKVSESDIDR ALLNLFSVRI 360 RLGLFNGDPT KLPYGNISPK DVCSPAHEAL ALDAARNGIV LLKNNLKLLP LSKSSSSLAV 420 IGPNANAART LLGNYAGPPC KTVTPLDALR GYVKNAVYHQ GCDAVVCSNA DINQAVAIAR 480 NADHVVLIMG LDQTQEKEDL DRVSLTLPGK QQDLITSAAN AAKKPVVLVL ICGGPVDVSF 540 ATNNDKIGSI IWAGYPGEAG GIALAEIIFG DHNPGGRLPV TWYPQSFVNV KMTDMRMRSA 600 TGYPGRTYKF YKGPKVFEFG HGLSYSKYSY RFKNLPETKL YLNQSKALLN SDSVRYALVS 660 EMEKEACNVA KTKVTVTVEN QGEMAGKHPV LMFARHERGG EDGKRAEKQL VGFKSIVLSY 720 GEKAEMEFEI GLCEHLSRAN EVGVMVVEEG KYFLTVGDSE LPLTVNV* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 4.0e-46 | 69 | 426 | 363 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-54 | 419 | 626 | 218 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 4.0e-55 | 57 | 351 | 324 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-73 | 51 | 759 | 792 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 767 | 788 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_177929.1 | 0 | 12 | 767 | 12 | 767 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002302284.1 | 0 | 17 | 765 | 25 | 740 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 17 | 767 | 21 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 17 | 767 | 21 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 7 | 767 | 14 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 107 | 730 | 91 | 696 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 3u48_A | 0 | 107 | 730 | 91 | 696 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 3u4a_B | 0 | 107 | 730 | 91 | 696 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 3u4a_A | 0 | 107 | 730 | 91 | 696 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4i3g_B | 6e-35 | 42 | 450 | 47 | 427 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |