Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10022851m |
Family | CE8 |
Protein Properties | Length: 600 Molecular Weight: 66153.9 Isoelectric Point: 4.8654 |
Chromosome | Chromosome/Scaffold: 4 Start: 3409051 End: 3411860 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 290 | 583 | 0 |
LVVAADGTGNFSTINEAISFAPNMSNERVLIYVREGVYEENIEIPSEKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDMMITNSAG PEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTVDYIFGNAAAVFQGCNIVSKLPMPGQFTVVTAQSRDSPDEDTGISMQNCSILA SDDLYNNSNKVKSYLGRPWREFSRTVIMESFIDEFIDGSGWSKWNGGGGVDTLYYGEYNNNGPGSETGKRVNWPGFHVMGYDDAFNFTATEFIT |
Full Sequence |
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Protein Sequence Length: 600 Download |
MTIDGIFNSV HEYYSKIIDI LVLSLYETKH EANPFLSTHL KTQDLSSPFA STLSSPMALF 60 SSLNFSFLLF LLFTSSAFSR SLNPNQTSLT SFCKNTPYPN ACFDSLKLSI SINISPNILS 120 FLLQTLKTAL SEAGKLTDLL SGPGTSNNLV EGQRGSLQDC KDLHHITSTF LERSISKIQD 180 GAEDSRKLAD ARAYLSAALT NKDTCLEGLE SASGPLKPKL VNSFTTTYKH VSNSLSALPK 240 QRRAKNSKTR GETKNRRLLG LFPDWVSNKD RRFLQDSNDG YDEYDPSEIL VVAADGTGNF 300 STINEAISFA PNMSNERVLI YVREGVYEEN IEIPSEKTNI VLIGDGSDVT FITGNRSVGD 360 GWTTFRSATL AVSGEGFLAR DMMITNSAGP EKHQAVALRV NADFVALYRC VIDGYQDTLY 420 THSFRQFYRE CDIYGTVDYI FGNAAAVFQG CNIVSKLPMP GQFTVVTAQS RDSPDEDTGI 480 SMQNCSILAS DDLYNNSNKV KSYLGRPWRE FSRTVIMESF IDEFIDGSGW SKWNGGGGVD 540 TLYYGEYNNN GPGSETGKRV NWPGFHVMGY DDAFNFTATE FITGDGWLGS TSFPYDDGI* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 3.0e-148 | 156 | 599 | 452 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-150 | 154 | 599 | 447 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 2.0e-164 | 85 | 599 | 543 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 6.0e-179 | 291 | 585 | 296 | + Pectinesterase. | ||
PLN02416 | PLN02416 | 0 | 83 | 599 | 517 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH56489.1 | 0 | 82 | 599 | 38 | 543 | pectin methylesterase 1 [Prunus persica] |
RefSeq | NP_180212.1 | 0 | 75 | 599 | 23 | 547 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002273535.1 | 0 | 60 | 599 | 1 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326320.1 | 0 | 81 | 599 | 31 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516192.1 | 0 | 82 | 599 | 37 | 543 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 291 | 599 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 290 | 599 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 6e-20 | 300 | 554 | 44 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 2e-19 | 300 | 535 | 18 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-19 | 300 | 535 | 18 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY902067 | 241 | 360 | 600 | 0 |
BX837887 | 302 | 83 | 384 | 0 |
FG610488 | 354 | 199 | 549 | 0 |
BU636118 | 206 | 395 | 600 | 0 |
EV123932 | 217 | 384 | 600 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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