| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10022868m |
| Family | AA1 |
| Protein Properties | Length: 594 Molecular Weight: 66097 Isoelectric Point: 9.8528 |
| Chromosome | Chromosome/Scaffold: 4 Start: 7138577 End: 7141281 |
| Description | laccase 2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 49 | 579 | 0 |
| TRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPKVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRTGWADGPSYVTQCPIRTGQSYVYNFTVTGQRGTLW WHAHIQWMRATVYGPLIILPKLHQPYPFPKPYKQVPIIFGEWFNADPQAVVQQALQTGGGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLI NAALDDELFFTIANHTLTVVEADASYVKPFQTSIVLLGPGQTTNVLLKTKPSYPNATFYMLARPYFTGQGTIDNTTVAGILQYQHHSKSSKNLSIIKPSL PPINSTSYAANFTKMFRSLASSTFPANVPKTVDKKFFFTVGLGTNPCPKNQTCQGPTNTTKFAASINNVSFILPNKTSLLQSYFLGKSKNVFMTDFPTAP IFPFNYTGTPPNNTMVSRGTKVVVLKYNTTVELVLQGTSILGIEAHPIHLHGFNFFVVGQGFGNFNPAIDPKQYNLVDPVERNTINVPSGGWVAIRFLAD NPGVWLMHCHIEIHLSWGLTMAWVVLDGDLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 594 Download |
| ELDHKTIEYT KNKYNFFSLN MATWVLHYLS VAFLITISYN IDAASAGITR HYQFDIQLKN 60 ITRLCKTKTI VTVNGKFPGP KVTAREGDNL QIKVVNHVSN NISIHWHGIR QLRTGWADGP 120 SYVTQCPIRT GQSYVYNFTV TGQRGTLWWH AHIQWMRATV YGPLIILPKL HQPYPFPKPY 180 KQVPIIFGEW FNADPQAVVQ QALQTGGGPN ASDAHTFNGL PGPLYNCSTK DTYKLMVKPG 240 KTYLLRLINA ALDDELFFTI ANHTLTVVEA DASYVKPFQT SIVLLGPGQT TNVLLKTKPS 300 YPNATFYMLA RPYFTGQGTI DNTTVAGILQ YQHHSKSSKN LSIIKPSLPP INSTSYAANF 360 TKMFRSLASS TFPANVPKTV DKKFFFTVGL GTNPCPKNQT CQGPTNTTKF AASINNVSFI 420 LPNKTSLLQS YFLGKSKNVF MTDFPTAPIF PFNYTGTPPN NTMVSRGTKV VVLKYNTTVE 480 LVLQGTSILG IEAHPIHLHG FNFFVVGQGF GNFNPAIDPK QYNLVDPVER NTINVPSGGW 540 VAIRFLADNP GVWLMHCHIE IHLSWGLTMA WVVLDGDLPN QKILPPPSDF PKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 5.0e-52 | 55 | 169 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 3.0e-64 | 24 | 572 | 578 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-75 | 26 | 567 | 579 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-86 | 49 | 567 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 47 | 593 | 548 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABW74558.1 | 0 | 21 | 593 | 1 | 573 | putative laccase [Boechera divaricarpa] |
| GenBank | ABW81073.1 | 0 | 35 | 593 | 1 | 563 | unknown [Cleome spinosa] |
| GenBank | ABW81166.1 | 0 | 21 | 593 | 1 | 573 | unknown [Capsella rubella] |
| RefSeq | NP_180477.1 | 0 | 21 | 593 | 1 | 573 | LAC2 (laccase 2); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002531824.1 | 0 | 28 | 593 | 12 | 576 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 50 | 567 | 4 | 517 | A Chain A, Crystal Structure Of Reca Superfamily Atpase Ph0284 From Pyrococcus Horikoshii Ot3 |
| PDB | 1asq_A | 0 | 50 | 567 | 4 | 517 | A Chain A, Crystal Structure Of Reca Superfamily Atpase Ph0284 From Pyrococcus Horikoshii Ot3 |
| PDB | 1asp_B | 0 | 50 | 567 | 4 | 517 | A Chain A, Crystal Structure Of Reca Superfamily Atpase Ph0284 From Pyrococcus Horikoshii Ot3 |
| PDB | 1asp_A | 0 | 50 | 567 | 4 | 517 | A Chain A, Crystal Structure Of Reca Superfamily Atpase Ph0284 From Pyrococcus Horikoshii Ot3 |
| PDB | 1aso_B | 0 | 50 | 567 | 4 | 517 | A Chain A, Crystal Structure Of Reca Superfamily Atpase Ph0284 From Pyrococcus Horikoshii Ot3 |
