Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10022923m |
Family | CE8 |
Protein Properties | Length: 561 Molecular Weight: 61497.4 Isoelectric Point: 9.1478 |
Chromosome | Chromosome/Scaffold: 4 Start: 14848317 End: 14851011 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 246 | 541 | 0 |
VTVIQNGTGNFTTINEAIAAAPNKTDGSNGYFLIYVTAGLYEEYVDVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNMTIRN TAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCT IRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWTGDFALSTLYYAEYNNSGPGSNTTNRVTWPGYHVINATDASNFTVTNFL |
Full Sequence |
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Protein Sequence Length: 561 Download |
MSQKLMFLFT IACLSLLPSL FLSAEIPATG NATSPSNVCR FAPDPSYCRS VLPNQPGDIY 60 SYGRFSLRRS LSRARRFITL IDNQLSRKGK VAAKATVGAL EDCKFLASLT MDFLLSSSQT 120 ADSAKTLSLS RAEDVHTLLS AAITNEQTCL EGLKSTASDN GLSGDLFNDT KLYGVSLALF 180 SKGWVPRRQR SRPKWQPQAS FKKFFGFRNG RLPLKMTERA RAVYNTVTRR KLLQAEADSV 240 QVSDIVTVIQ NGTGNFTTIN EAIAAAPNKT DGSNGYFLIY VTAGLYEEYV DVPKNKRYVM 300 MIGDGINQTV ITGNRSVVDG WTTFNSATFI LSGPNFIGVN MTIRNTAGPT KGQAVALRSG 360 GDLSVFYSCS FEAYQDTLYT HSLRQFYREC DVYGTVDFIF GNAAVVLQNC NLYPRQPRKG 420 QSNEVTAQGR TDPNQNTGTA IHGCTIRPAD DLATSNYTVK TYLGRPWKEY SRTVVMQTYI 480 DGFLEPSGWN AWTGDFALST LYYAEYNNSG PGSNTTNRVT WPGYHVINAT DASNFTVTNF 540 LVGEGWIGQT GVPFVGGLIA * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02416 | PLN02416 | 1.0e-147 | 100 | 558 | 464 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-150 | 100 | 558 | 463 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 1 | 560 | 566 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 34 | 559 | 545 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 246 | 544 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK84428.1 | 0 | 1 | 560 | 1 | 562 | papillar cell-specific pectin methylesterase-like protein [Brassica napus] |
GenBank | AAL87311.1 | 0 | 8 | 560 | 6 | 573 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_566103.1 | 0 | 1 | 560 | 1 | 560 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_567227.1 | 0 | 8 | 560 | 6 | 573 | ATPMEPCRB; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002523112.1 | 0 | 19 | 559 | 26 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 248 | 558 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 238 | 558 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 7e-20 | 238 | 416 | 27 | 221 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 3e-19 | 256 | 494 | 18 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-19 | 256 | 494 | 18 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |